@tome V2.1
Ref.
-
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Doc.
Global output mode :
Group entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Selected Ligands Contact
Catalytic Site Atlas
Show alignment :
Best alignments
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
Structural Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Modeller Score
Verify3D Model Score
QMean Model Score
Hide column
Complexes Prediction
Show Ligands of Templates
Comparative Docking Score
Virtual Screening Score
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Comparative Docking Tab
Atome Color :
Mutated
Helix
Strand
Conserved
Query sequence : >T0665: (2012-05-11 )
KNVIKKKGEIIILWTRNDDREILLECQKRGPSFKTFAYLAAKLDKNPNQVSERFQQLMKLFEKSKCR
Atome Classification :
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--------------------------------------------------KNV-I----------------KKKGEIIILWTRNDD--REILLECQKRGP-SFKTFAYLAAK------------L-D-KNPNQVSERFQQ-LMKLFEKSKCR---------------------------------------------------------------------------------------------------------------------------------------------------------------
15
SP3
86.87
41%
-48.74
- C2 -
1UG2
-
A:
[1-95]
-----------------------------GP
S
G
S
S
G
A
G
A
L
P
K
A
S
E
A
T
V
C
A
N
N
S
K
V
----------------
S
S
T
G
E
K
V
V
L
W
T
R
E
A
D
--
R
V
I
L
T
M
C
Q
E
Q
G
A
-
Q
P
H
T
F
S
V
I
S
Q
Q
------------
L
G
N
-
K
T
P
V
E
V
S
H
R
F
R
E
-
L
M
Q
L
F
H
T
A
-
C
E
SGPSSG---------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
86.64
43%
-46.08
- C2 -
1UG2
-
A:
[26-87]
------------------------------------------------------
V
----------------
S
S
T
G
E
K
V
V
L
W
T
R
E
A
D
--
R
V
I
L
T
M
C
Q
E
Q
G
A
-
Q
P
H
T
F
S
V
I
S
Q
Q
------------
L
G
N
-
K
T
P
V
E
V
S
H
R
F
R
E
-
L
M
Q
L
F
H
T
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast
86.17
41%
-46.08
- C2 -
1UG2
-
A:
[26-87]
------------------------------------------------------
V
----------------
S
S
T
G
E
K
V
V
L
W
T
R
E
A
D
--
R
V
I
L
T
M
C
Q
E
Q
G
A
-
Q
P
H
T
F
S
V
I
S
Q
Q
------------
L
G
N
-
K
T
P
V
E
V
S
H
R
F
R
E
-
L
M
Q
L
F
H
T
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
Fugue
83.07
38%
-36.06
- C2 -
1UG2
-
A:
[1-95]
----------------------------GP
S
G
S
S
G
A
G
A
L
P
K
A
S
E
A
T
V
C
A
N
N
S
K
-
V
----------------
S
S
T
G
E
K
V
V
L
W
T
R
E
A
D
--
R
V
I
L
T
M
C
Q
E
Q
G
A
-
Q
P
H
T
F
S
V
I
S
Q
Q
------------
L
G
N
-
K
T
P
V
E
V
S
H
R
F
R
E
-
L
M
Q
L
F
H
T
A
C
E
S
GPSSG----------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
56.87
14%
-52.17
- C2 -
2DIN
-
A:
[8-58]
----------------------------------------------------------------------------
K
K
T
E
W
S
R
E
E
E
--
E
K
L
L
H
L
A
K
L
M
P
T
----
Q
W
R
T
I
A
P
I
------------
I
-
G
-
R
T
A
A
Q
C
L
E
H
Y
E
F
-
L
L
D
K
A
A
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
HHSearch
53.39
23%
-39.93
- C2 -
1GUU
1
MYB_MOUSE
A:
[5-49]
-------------------------------------------------------------------------------
R
W
T
R
E
E
D
--
E
K
L
K
K
L
V
E
Q
N
G
T
-
D
--
D
W
K
V
I
A
N
Y
------------
L
P
N
-
R
T
D
V
Q
C
Q
H
R
W
Q
K
-
V
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
HHSearch
52.76
21%
-40.98
- C2 -
1OFC
1
X:
[212-278]
-----------------------------------------------------------------------------
G
K
N
Y
T
E
I
E
D
--
R
F
L
V
C
M
L
H
K
L
G
F
D
K
E
N
V
Y
E
E
L
R
A
A
IRASPQFRFDWF
I
K
S
-
R
T
A
L
E
L
Q
R
R
C
N
T
-
L
I
T
L
I
E
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
HHSearch
47.78
23%
-29.52
- C2 -
1GV2
1
MYB_MOUSE
A:
[54-102]
---------------------------------------------------------------------------
V
K
K
T
S
W
T
E
E
E
D
--
R
I
I
Y
Q
A
H
K
R
L
G
N
-
R
---
W
A
E
I
A
K
L
------------
L
P
G
-
R
T
D
N
A
I
K
N
H
W
N
S
-
T
M
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
SP3
47.43
22%
-30.06
- C2 -
1H8A
2
MYB_AVIMB
C:
[22-78]
-------------------------------------------------N
P
E
L
-
N
----------------
K
G
P
------
W
T
K
E
E
D
--
Q
R
V
I
E
H
V
Q
K
Y
G
P
-
K
--
R
W
S
D
I
A
K
H
------------
L
K
G
-
R
I
G
K
Q
C
R
E
R
W
H
N
---
H
L
N
P
E
V
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------
29
HHSearch
47.17
16%
-39.80
- C2 -
2CU7
-
A:
[5-55]
-------------------------------------------------------------------------
S
S
G
Y
S
V
K
W
T
I
E
E
K
--
E
L
F
E
Q
G
L
A
K
F
G
R
----
R
W
T
K
I
S
K
L
------------
I
G
S
-
R
T
V
L
Q
V
K
S
Y
A
R
Q
-
Y
F
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
HHSearch
46.68
18%
-42.70
- C2 -
2K9N
-
?
A:
[53-104]
-----------------------------------------------------------------------------
T
D
P
W
S
P
E
E
D
--
M
L
L
D
Q
K
Y
A
E
Y
G
P
-
K
---
W
N
K
I
S
K
F
------------
L
K
N
-
R
S
D
N
N
I
R
N
R
W
M
M
-
I
A
R
H
R
A
K
H
------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
Fugue
46.20
13%
-96.88
- C2 -
1N2Z
20
BTUF_ECOLI
A:
[1-245]
AA
P
R
V
I
T
LS
P
A
N
T
E
L
A
F
A
A
GITPVGVSSYSDYP
P
Q
A
Q
K
IEQVSTWQGMN
L
E
R
I
-
V
----------------
A
L
K
P
D
L
V
I
A
W
R
G
G
N
A
--
E
R
Q
V
D
Q
L
A
S
L
G
I
----
K
V
M
W
V
D
A
T
-----------------
S
I
E
Q
I
A
N
A
L
R
Q
-
L
A
P
W
S
P
Q
P
D
K
A
E
Q
A
A
Q
S
L
L
D
Q
Y
A
Q
L
K
A
Q
Y
AD
K
P
K
K
R
V
F
LQFGINP
P
F
T
S
G
KES
I
Q
N
Q
V
L
E
V
C
G
G
E
N
IFKDSRVP
W
P
Q
V
S
R
E
Q
V
L
A
R
SPQ
A
I
V
I
T
G
GPDQ
I
P
K
I
K
Q
Y
W
GEQLK
I
P
V
I
P
L
T
S
D
W
F
E
RASPR
I
I
L
A
A
Q
Q
L
C
N
A
L
S
Q
VD-------------------------
42
HHSearch
45.31
27%
-38.42
- C2 -
1H8A
2
MYB_AVIMB
C:
[80-125]
------------------------------------------------------------------------------
T
S
W
T
E
E
E
D
--
R
I
I
Y
Q
A
H
K
R
L
G
N
----
R
W
A
E
I
A
K
L
------------
L
P
G
-
R
T
D
N
A
V
K
N
H
W
N
S
-
T
M
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
SP3
44.01
14%
-80.88
- C2 -
1YB1
6
DHB11_HUMAN
A:
[25-268]
-------------------------------------------RRKSVTG
E
I
V
-
L
I
T
GAGHG
I
G
R
L
T
A
Y
E
F
A
K
L
K
S
K
L
V
L
W
D
I
N
K
H
G
L
E
E
T
A
A
K
C
K
G
L
G
A
-
K
-----
V
H
T
F
V
------------
V
-
D
C
S
N
R
E
D
I
Y
S
S
A
K
K
-
V
K
A
E
I
G
----
D
VSILVNN
A
G
V
V
Y
T
S
DLFAT
Q
D
P
Q
I
E
K
T
F
E
V
N
V
L
A
H
F
W
T
T
K
A
F
L
P
A
M
T
K
N
N
H
G
H
I
V
T
V
ASAAHVSVPF
L
L
A
Y
C
S
S
K
F
A
A
V
G
F
H
K
T
L
T
D
E
L
A
A
L
QITG
V
K
T
T
C
LCPNFVNTGFIKNPSTSLGPTLE
P
E
E
V
V
N
R
L
M
H
G
I
L
T
EQK
M
I
F
I
P
S
SIA
F
L
T
T
L
E
RIL
22
SP3
43.83
17%
-24.63
- C2 -
1H88
1
MYB_MOUSE
C:
[5-54]
------------------------------------------------------------------------
G
K
T
R
----
W
T
R
E
E
D
--
E
K
L
K
K
L
V
E
Q
N
G
---
T
D
D
W
K
V
I
A
N
Y
------------
L
P
N
-
R
T
D
V
Q
C
Q
H
R
W
Q
K
V
L
N
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
HHSearch
43.46
7%
-36.66
- C2 -
1X58
-
A:
[9-57]
------------------------------------------------------------------------------
K
D
F
T
K
E
E
V
--
N
Y
L
F
H
G
V
K
T
M
G
N
-
H
---
W
N
S
I
L
W
S
F
PF---------
Q
K
G
-
R
R
A
V
D
L
A
H
K
Y
H
R
-
L
I
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
HHSearch
43.30
20%
-32.54
* C2 *
2DIM
-
CDC5L_HUMAN
A:
[11-55]
-------------------------------------------------------------------------------
V
W
R
N
T
E
D
--
E
I
L
K
A
A
V
M
K
Y
G
K
-
N
--
Q
W
S
R
I
A
S
L
------------
L
H
R
-
K
S
A
K
Q
C
K
A
R
W
Y
E
-
W
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
HHSearch
42.59
16%
-9.89
- C2 -
2LLK
-
A:
[20-68]
--------------------------------------------------------------------------
R
N
H
V
G
K
Y
T
P
E
E
I
--
E
K
L
K
E
L
R
I
K
H
G
N
-
D
---
W
A
T
I
G
A
A
------------
L
-
G
-
R
S
A
S
S
V
K
D
R
C
R
L
-
M
K
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
HHSearch
42.27
30%
-19.53
- C2 -
1GVD
3
A:
[5-48]
-------------------------------------------------------------------------------
P
W
T
K
E
E
D
--
Q
R
L
I
K
L
V
Q
K
Y
G
P
-
K
--
R
W
S
V
I
A
K
H
------------
L
K
G
-
R
I
G
K
Q
C
R
E
R
W
H
N
-
H
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
41.53
20%
-29.71
- C2 -
2CQR
-
A:
[18-68]
-----------------------------------------------------------------------------
E
E
P
W
T
Q
N
Q
Q
--
K
L
L
E
L
A
L
Q
Q
Y
P
R
G
S
S
D
C
W
D
K
I
A
R
C
------------
V
P
S
-
K
S
K
E
D
C
I
A
R
Y
K
L
-
L
V
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
User Run . : Multi Template Modeling Result:
.........10........20........30........40........50........60.......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
KNVIKKKGEIIILWTRNDDREILLECQKRGPSFKTFAYLAAKLDKNPNQVSERFQQLMKLFEKSKCR
68
100.00
100%
?
- C- -
M068
-
A:
[2-103]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
67
100.00
100%
?
- C- -
M067
-
A:
[10-81]
---------
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
66
100.00
100%
?
- C- -
M066
-
A:
[10-68]
---------
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
62
100.00
100%
?
- C- -
M062
-
A:
[1-91]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
61
100.00
100%
?
- C- -
M061
-
A:
[1-91]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
60
100.00
100%
?
- C- -
M060
-
A:
[1-91]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
56
100.00
100%
?
- C- -
M056
-
A:
[1-138]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
55
100.00
100%
?
- C- -
M055
-
A:
[3-136]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
54
100.00
100%
?
- C- -
M054
-
A:
[3-136]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
50
100.00
100%
?
- C- -
M050
-
A:
[1-91]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
49
100.00
100%
?
- C- -
M049
-
A:
[2-90]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
48
100.00
100%
?
- C- -
M048
-
A:
[2-90]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
65
89.68
100%
-82.56
- C- -
M065
-
A:
[10-81]
---------
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
59
89.04
100%
-49.45
- C- -
M059
-
A:
[1-91]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
58
89.04
100%
-49.45
- C- -
M058
-
A:
[1-91]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
57
89.04
100%
-49.45
- C- -
M057
-
A:
[1-91]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
64
88.05
100%
-80.93
- C- -
M064
-
A:
[10-68]
---------
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
51
85.51
100%
-59.21
- C- -
M051
-
A:
[1-138]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
45
81.47
100%
-57.25
- C- -
M045
-
A:
[1-91]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
52
31.47
100%
22.45
- C- -
M052
-
A:
[3-136]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
63
26.05
100%
80.36
- C- -
M063
-
A:
[2-103]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
53
23.09
100%
59.34
- C- -
M053
-
A:
[3-136]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
47
17.57
100%
83.17
- C- -
M047
-
A:
[2-90]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R
46
17.57
100%
83.17
- C- -
M046
-
A:
[2-90]
K
N
V
I
K
K
K
G
E
I
I
I
L
W
T
R
N
D
D
R
E
I
L
L
E
C
Q
K
R
G
P
S
F
K
T
F
A
Y
L
A
A
K
L
D
K
N
P
N
Q
V
S
E
R
F
Q
Q
L
M
K
L
F
E
K
S
K
C
R