@tome V2.1
Ref.
-
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Doc.
Global output mode :
Group entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Selected Ligands Contact
Catalytic Site Atlas
Show alignment :
Best alignments
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
Structural Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Modeller Score
Verify3D Model Score
QMean Model Score
Hide column
Complexes Prediction
Show Ligands of Templates
Comparative Docking Score
Virtual Screening Score
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Comparative Docking Tab
Atome Color :
Mutated
Helix
Strand
Conserved
Query sequence : >T0666: (2012-05-14 )
MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIVCNVVVITYSALHPTAPVEGAEDIVQVSHHLTSFYGPATGLLFGFTYLYAAINHTFGLDWRPYSWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKFTPWLAIIEGILTAWIPAWLLFIQHWV
Atome Classification :
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MLGLVLLYVGIVLISNGICGL-TK-VDP-KS-TAVM-NFFVGG----LSIVCNVVVITYSALH-PTA--P---VEG----AEDIVQ-VSHHLTSFY--GP--ATGLLFGF-TYLYAAINHTF---GLD-WR--PY-SWYSLFVAIN------TVPAAILSHYSD----MLDDH-KVLGITEGDW---WAIIWLAW-GVLW----------------LTAF-I---ENILKIPLGKFTP--WLAII--EGILTAW-----IPA------WLL--FIQHWV-------
8
Fugue
82.24
13%
-129.46
- C8 -
2P14
3
?
A:
[1-186]
M
Q
D
I
L
D
F
Y
E
E
V
E
K
T
I
N
P
P
N
Y
F
-
E
W
-
N
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Y
-
R
V
-
F
K
K
L
-----
G
S
----
Y
K
N
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N
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K
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-
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N
--
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----
V
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-
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---
E
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--
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T
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L
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-
K
------
S
I
D
L
S
F
A
R
H
I
G
F
----
N
K
E
S
E
-
P
V
I
P
L
T
------------
V
D
Q
-
F
K
K
L
----------------
V
T
Q
L
-
K
---
G
D
G
E
H
F
N
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N
K
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E
--
I
L
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Y
D
Q
-----
A
E
E
------
W
L
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--
F
I
E
Y
N
L
K------
7
Fugue
78.28
16%
-76.70
- C8 -
2AUA
-
?
A:
[13-219]
-
L
G
T
E
N
L
Y
N
-----
E
T
E
F
Y
A
Y
-
H
I
-
V
T
R
-
K
K
M
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I
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M
I
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F
N
K
N
----
Q
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--
N
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Y
H
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F
F
E
R
E
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-
L
N
A
--
N
---
G
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D
----
G
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N
-
N
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Y
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N
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--------------------
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-
E
---
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--
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Y
W
K
GNNE
L
P
E
------
L
L
I
--
N
G
E
I
E
V
VEIIDDF
33
SP3
64.30
9%
-107.68
* C9 *
2HFT
-
?
?:
[107-218]
-----------------------------------------------------------
N
L
G
Q
-
P
T
I
--
Q
S
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Q
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G
----
T
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V
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-
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--
R
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--
N
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----------
S
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---
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-
L
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-------
Y
T
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Y
Y
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------
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N
T
N
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----
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------
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D
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E
N
---
Y
C
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S
-------------------------
V
Q
A
V
-
I
PSR
T
V
N
R
K
S
T
D
S
P
V
E
C
--
M
G
--------------------------------------------
26
SP3
63.78
7%
-63.10
- C5 -
1EHX
-
?
A:
[1-94]
--------------------------------------------------------
M
Q
D
P
T
I
N
-
P
T
S
I
S
A
---
K
A
G
----
S
F
A
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T
K
-
I
T
L
T
P
N
---------------
G
N
-
T
--------
F
N
---
G
I
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-
E
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--
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-
S
Q
Y
T
K
G
T
N
E
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------
T
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A
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N
T
L
P
E
----
N
T
T
K
T
-
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F
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----------
K
N
-
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K
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T
----------------
I
T
V
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-
P
---
K
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I
P
G
L
E
------------------------------------------------------
11
Fugue
63.45
15%
-107.66
- C8 -
2JOE
-
YEHR_ECOLI
A:
[1-139]
-
M
G
D
K
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E
S
K
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--
I
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A
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M
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----------------
M
K
A
------
A
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F
K
E
V
K
L
E
H
H
---------------------------------------
H
H
H
H
-------
1
PsiBlast
61.59
30%
-75.31
- C8 -
1WUU
3
GALK1_HUMAN
A:
[144-211]
-----------------------------------------
G
G
----
L
S
S
S
A
S
L
E
V
A
T
Y
T
F
L
Q
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Q
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P
---
D
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A
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--
P
C
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M
G
Q
K
G
H
A
L
---
L
I
D
-
C
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast
61.55
30%
-63.64
- C8 -
1WUU
3
GALK1_HUMAN
B:
[144-211]
-----------------------------------------
G
G
----
L
S
S
S
A
S
L
E
V
A
T
Y
T
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L
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Q
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C
--
P
---
D
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A
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Q
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A
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---
L
I
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-
C
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
58.39
17%
-145.58
- C8 -
1TDP
-
CB2I_CARML
A:
[1-111]
-----------------------------------------------
M
D
I
K
S
Q
T
L
Y
L
N
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A
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---
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A
N
E
F
L
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-
C
A
G
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A
-
S
--
N
S
--
E
N
S
Y
I
E
V
I
-
S
L
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R
G
I
S
S
Y
Y
---
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K
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R
K
Y
E
I
----
A
K
G
L
M
-
S
V
P
Y
I
Y
F
---------------------------------------------------------------------------------------------------------
16
HHSearch
57.46
36%
152.16
- C8 -
2NR1
-
A:
[10-23]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
S
A
M
W
F
S
W
-
G
V
L
L
----------------
N
S
--------------------------------------------------------------------
30
SP3
52.44
10%
-107.66
- C9 -
1JMX
-
?
A:
[282-363]
----------------
G
K
A
R
L
-
L
A
-
V
Q
P
-
A
F
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I
K
A
------
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----
E
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E
I
--
T
L
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K
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--
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----
A
G
----
V
E
V
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E
V
-
L
E
Q
T
P
T
L
V
R
---------------------
L
K
A
R
A
---
A
A
D
-
A
K
--
P
G
----
Q
R
E
V
A
V
G
------
T
L
K
G
V
N
L
A
V
Y
D
---------------------------------------------------------------------------------------------------------------------------
3
PsiBlast
52.24
35%
49.67
- C7 -
3HJG
1
?
A:
[159-191]
-----------------------------------------------------------------------------------------------------------------------
H
V
L
---
G
V
D
-
W
R
--
N
P
-
Q
W
Y
S
T
L
A
I
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N
----------
A
S
V
T
H
I
T
I
----
T
I
D
D
Q
-----------------------------------------------------------------------------------------------------------------
13
Fugue
50.47
15%
-61.48
- C8 -
1W09
-
AHSP_HUMAN
A:
[1-92]
------------------------------------------------------
L
L
K
A
N
K
D
L
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A
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M
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R
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VTG
E
P
Q
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E
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--
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A
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E
L
R
Q
E
L
N
------
T
L
A
N
P
F
L
A
K
Y
R
D
----
F
L
K
S
H
-
E
L
--------------------------------------------------------------------------------------------------------------
31
SP3
48.06
9%
-94.35
- C9 -
1JMX
2
?
A:
[364-494]
-------------------------------------------------------------
K
V
-
E
E
V
--
K
---
V
V
P
----
A
F
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I
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R
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N
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A
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P
--
K
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--
Q
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R
---------
F
E
A
E
A
W
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---
D
A
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-
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P
--------
L
R
I
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Y
L
P
A
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K
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E
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F
N
E
R
A
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E
D
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D
V
-
K
F
A
G
K
M
Q
A
D
G
--------------
V
F
----------------
V
P
G
G
-
A
---
G
P
N
P
E
R
K
M
M
--
T
N
--
N
A
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N
L
--
K
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A
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D
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T
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R
W
N
NPPLP--
14
Fugue
45.92
14%
-11.41
- C8 -
3FH3
2
?
A:
[12-157]
----------------
K
H
A
G
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M
T
L
-
E
A
Y
M
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-
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-
S
E
A
K
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E
--------------------
M
G
T
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--
E
---
Y
E
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----
F
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E
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-
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A
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A
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--
G
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------
N
I
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A
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---
R
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----
E
F
D
R
Y
M
E
-------------------------------------------
A
L
M
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---
H
E
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G
A
IK
V
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--
E
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K
E
R
F
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I
K
A
------
E
Q
F
M
E
Y
V
D
E
K
V
-------
20
HHSearch
38.05
20%
3.61
- C6 -
3IXS
1
RYBP_HUMAN
B:
[5-29]
-------------------
R
L
-
K
N
-
V
D
R
-
S
T
-
A
Q
Q
L
-
A
V
T
V
G
N
----
V
T
V
I
I
T
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
Fugue
36.90
21%
-10.55
- C4 -
1UT3
-
SPHE2_APTPA
A:
[1-38]
--------------
S
F
G
L
C
R
L
-
R
R
G
F
C
A
-
R
G
-
R
C
R
F
-
P
S
I
P
I
G
RCSR
F
V
Q
C
C
R
R
V
W
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
36.86
30%
-1.67
- C8 -
3GD0
-
?
A:
[306-338]
-------------------------------------------------------------------------------------
Q
-
P
D
R
S
A
A
G
F
Y
--
Q
E
--
P
------
V
-
T
N
H
Y
A
R
I
I
H
A
H
---
M
A
D
-
G
K
--
A
Y
-
G
-----------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast
34.32
27%
-34.86
- C8 -
3P03
-
BETP_CORGL
A:
[329-389]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
A
G
E
W
L
G
S
W
T
I
F
Y
W
A
W
-
W
I
S
W
S
P
F
V
G
M
F
L
A
R
ISRGRS
I
R
E
F
-
I
---
L
G
V
L
L
V
P
A
G
V
S
T
V
--
W
F
S
I
F
--
G
G
-------------------------------------
4
PsiBlast
31.73
27%
-20.07
- C8 -
2WIT
1
BETP_CORGL
A:
[329-389]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
A
G
E
W
L
G
S
W
T
I
F
Y
W
A
W
-
W
I
S
W
S
P
F
V
G
M
F
L
A
R
I
S
RGRS
I
R
E
F
-
I
---
L
G
V
L
L
V
P
A
G
V
S
T
V
--
W
F
S
I
F
--
G
G
-------------------------------------
23
HHSearch
30.98
15%
-86.07
* C8 *
3PJS
-
?
K:
[73-113]
------------------------------------------------------------------------------------------------------------------------------------------
W
W
S
V
E
T
A
T
------
T
V
G
Y
G
D
L
Y
P
V
T
----------------
L
W
G
R
L
---
V
A
V
V
V
M
V
A
-
G
I
T
S
----------------
F
G
L
V
-
T
----------------------------------------------------------------
User Run . : Multi Template Modeling Result:
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIVCNVVVITYSALHPTAPVEGAEDIVQVSHHLTSFYGPATGLLFGFTYLYAAINHTFGLDWRPYSWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKFTPWLAIIEGILTAWIPAWLLFIQHWV
51
95.78
100%
-146.30
- C- -
M051
-
A:
[2-218]
M
L
G
L
V
L
L
Y
V
G
I
V
L
I
S
N
G
I
C
G
L
T
K
V
D
P
K
S
T
A
V
M
N
F
F
V
G
G
L
S
I
V
C
N
V
V
V
I
T
Y
S
A
L
H
P
T
A
P
V
E
G
A
E
D
I
V
Q
V
S
H
H
L
T
S
F
Y
G
P
A
T
G
L
L
F
G
F
T
Y
L
Y
A
A
I
N
H
T
F
G
L
D
W
R
P
Y
S
W
Y
S
L
F
V
A
I
N
T
V
P
A
A
I
L
S
H
Y
S
D
M
L
D
D
H
K
V
L
G
I
T
E
G
D
W
W
A
I
I
W
L
A
W
G
V
L
W
L
T
A
F
I
E
N
I
L
K
I
P
L
G
K
F
T
P
W
L
A
I
I
E
G
I
L
T
A
W
I
P
A
W
L
L
F
I
Q
H
W
V
46
93.50
100%
-126.30
- C- -
M046
-
A:
[2-218]
M
L
G
L
V
L
L
Y
V
G
I
V
L
I
S
N
G
I
C
G
L
T
K
V
D
P
K
S
T
A
V
M
N
F
F
V
G
G
L
S
I
V
C
N
V
V
V
I
T
Y
S
A
L
H
P
T
A
P
V
E
G
A
E
D
I
V
Q
V
S
H
H
L
T
S
F
Y
G
P
A
T
G
L
L
F
G
F
T
Y
L
Y
A
A
I
N
H
T
F
G
L
D
W
R
P
Y
S
W
Y
S
L
F
V
A
I
N
T
V
P
A
A
I
L
S
H
Y
S
D
M
L
D
D
H
K
V
L
G
I
T
E
G
D
W
W
A
I
I
W
L
A
W
G
V
L
W
L
T
A
F
I
E
N
I
L
K
I
P
L
G
K
F
T
P
W
L
A
I
I
E
G
I
L
T
A
W
I
P
A
W
L
L
F
I
Q
H
W
V
53
92.18
100%
-106.95
- C- -
M053
-
A:
[2-207]
M
L
G
L
V
L
L
Y
V
G
I
V
L
I
S
N
G
I
C
G
L
T
K
V
D
P
K
S
--------
G
G
L
S
I
V
C
N
V
V
V
I
T
Y
S
A
L
H
P
T
A
P
V
E
G
A
E
D
I
V
Q
V
S
H
H
L
T
S
F
Y
G
P
A
T
G
L
L
F
G
F
T
Y
L
Y
A
A
I
N
H
T
F
G
L
D
W
R
P
Y
S
W
Y
S
L
F
V
A
I
N
T
V
P
A
A
I
L
S
H
Y
S
D
M
L
D
D
H
K
V
L
G
I
T
E
G
D
W
W
A
I
I
W
L
A
W
G
V
L
W
L
T
A
F
I
E
N
I
L
K
I
P
L
G
K
F
----------------------
Q
H
W
V
48
85.62
100%
-99.62
- C- -
M048
-
A:
[2-207]
M
L
G
L
V
L
L
Y
V
G
I
V
L
I
S
N
G
I
C
G
L
T
K
V
D
P
K
S
--------
G
G
L
S
I
V
C
N
V
V
V
I
T
Y
S
A
L
H
P
T
A
P
V
E
G
A
E
D
I
V
Q
V
S
H
H
L
T
S
F
Y
G
P
A
T
G
L
L
F
G
F
T
Y
L
Y
A
A
I
N
H
T
F
G
L
D
W
R
P
Y
S
W
Y
S
L
F
V
A
I
N
T
V
P
A
A
I
L
S
H
Y
S
D
M
L
D
D
H
K
V
L
G
I
T
E
G
D
W
W
A
I
I
W
L
A
W
G
V
L
W
L
T
A
F
I
E
N
I
L
K
I
P
L
G
K
F
----------------------
Q
H
W
V
54
85.13
100%
-99.62
- C- -
M054
-
A:
[2-207]
M
L
G
L
V
L
L
Y
V
G
I
V
L
I
S
N
G
I
C
G
L
T
K
V
D
P
K
S
--------
G
G
L
S
I
V
C
N
V
V
V
I
T
Y
S
A
L
H
P
T
A
P
V
E
G
A
E
D
I
V
Q
V
S
H
H
L
T
S
F
Y
G
P
A
T
G
L
L
F
G
F
T
Y
L
Y
A
A
I
N
H
T
F
G
L
D
W
R
P
Y
S
W
Y
S
L
F
V
A
I
N
T
V
P
A
A
I
L
S
H
Y
S
D
M
L
D
D
H
K
V
L
G
I
T
E
G
D
W
W
A
I
I
W
L
A
W
G
V
L
W
L
T
A
F
I
E
N
I
L
K
I
P
L
G
K
F
----------------------
Q
H
W
V
56
84.82
100%
-114.72
- C- -
M056
-
A:
[2-207]
M
L
G
L
V
L
L
Y
V
G
I
V
L
I
S
N
G
I
C
G
L
T
K
V
D
P
K
S
--------
G
G
L
S
I
V
C
N
V
V
V
I
T
Y
S
A
L
H
P
T
A
P
V
E
G
A
E
D
I
V
Q
V
S
H
H
L
T
S
F
Y
G
P
A
T
G
L
L
F
G
F
T
Y
L
Y
A
A
I
N
H
T
F
G
L
D
W
R
P
Y
S
W
Y
S
L
F
V
A
I
N
T
V
P
A
A
I
L
S
H
Y
S
D
M
L
D
D
H
K
V
L
G
I
T
E
G
D
W
W
A
I
I
W
L
A
W
G
V
L
W
L
T
A
F
I
E
N
I
L
K
I
P
L
G
K
F
----------------------
Q
H
W
V