@tome V2.1
Ref.
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Doc.
Global output mode :
Group entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Selected Ligands Contact
Catalytic Site Atlas
Show alignment :
Best alignments
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
Structural Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Modeller Score
Verify3D Model Score
QMean Model Score
Hide column
Complexes Prediction
Show Ligands of Templates
Comparative Docking Score
Virtual Screening Score
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Comparative Docking Tab
Atome Color :
Mutated
Helix
Strand
Conserved
Query sequence : >T0691: (2012-05-29 )
MKKLYFFTMLSIMLLAVTGAMAQKKTKFKAADLKGIWQLCHYVSESPDVPGALKPSNTFKVLSDDGRIVNFTIIPGADAIITGYGTYKQLTDDSYKESIEKNIHLPMLDNQDNILEFEIKDNDYLHLKYFIKSDLNGNELNTWYYETWKRVEMPAKFPEDIVR
Atome Classification :
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------MKKLYFFTMLSIMLLAVTGAMAQKKTKFK--------------AADLKGIWQLCHYV-SESP--DVPGALKPS-NTFKVLSD-DGRIVNFTII-PG---ADA----II----------------TGY--GTYKQ--LTDD-SY------KESIEKN-I---------HL-----PMLDN----QD-NILEFEIKDND----YLHL--KYFIKSD---LNG--NELNTWYYETW--KR-V-------EMPAKFPEDIVR-----
24
Fugue
70.99
16%
-10.95
- C2 -
2JOZ
-
YXEF_BACSU
A:
[1-135]
----------------------------------
M
I
M
V
S
G
C
---
Q
Q
Q
K
E
E
--------------
T
P
F
Y
Y
G
T
W
D
--------
E
G
--
R
A
P
G
P
T
D
G
V
-
K
S
A
T
V
T
F
T
-
E
D
E
V
V
E
T
E
V
M
-
E
G
---
R
G
E
----
V
Q
----------------
L
P
F
--
M
A
Y
K
V
--
I
S
Q
S
-
T
-------
D
G
S
I
E
I
Q
-
Y
---------
L
G
-----
P
Y
Y
P
L
----
K
S
-
T
L
K
R
G
E
---------------
N
G
T
L
I
W
E
---
Q
N
G
--
Q
R
K
T
M
T
R
I
E
S
K
--
T
G
-
R
-------
E
E
K
D
E
K
S
K
S
L
E
H
HHHHH
49
SP3
64.80
11%
2.62
- C3 -
1JMX
2
?
A:
[364-494]
--------------------------------------------
K
V
E
E
V
K
--------------
V
V
P
A
F
S
I
A
R
I
G
E
N
G
-
A
S
V
P
--
K
V
Q
G
R
F
E
----
A
E
A
W
G
K
D
A
N
G
Q
P
L
R
I
G
Y
L
-
P
A
---
S
W
K
----
V
E
----------------
P
F
N
--
E
R
A
V
E
--
D
E
D
V
-
K
F
------
A
G
K
M
Q
A
D
G
V
---------
F
V
-----
P
G
G
A
G
----
P
N
-
P
--
E
R
K
M
M
T
N
N
----
A
G
N
L
--
K
V
I
A
T
L
A
---
D
G
G
--
Q
T
G
E
G
H
M
I
V
T
V
--
Q
R
W
N
-------
N
P
P
L
P
------------
25
Fugue
64.74
17%
-42.70
- C5 -
1YAR
-
?
O:
[10-237]
KRAALIQNLRDSYTETSSFAV
I
E
E
W
A
A
G
T
L
Q
E
I
E
G
I
A
K
A
A
A
E
A
H
G
V
I
R
N
S
TYGRAQAEKSPEQL
L
G
V
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Q
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Y
Q
D
L
C
H
N
V
Y
C
Q
A
E
--
T
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I
A
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E
E
D
N
-
L
G
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A
V
Q
H
A
V
L
-
K
I
---
I
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E
----
L
E
IKTLGSGEKSGSGGAP
T
P
I
--
G
M
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A
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--
R
E
Y
L
-
S
A
------
R
S
T
V
E
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K
-
L
---------
L
G
-----
G
G
S
Q
S
----
P
S
-
L
L
L
E
L
R
Q
I
D
A
D
----
F
M
L
K
--
V
E
L
A
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T
H
---
L
S
T
MV
R
A
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I
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A
Y
L
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N
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--
K
K
-
L
-------
I
Q
P
R
T
G
S
D
H
M
V
S
-----
26
Fugue
63.10
10%
-80.11
- C2 -
1SR3
-
CCME_ECOLI
A:
[1-114]
---------------------
L
R
S
N
I
D
L
------
F
Y
T
P
G
E
I
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Y
G
K
R
E
T
Q
Q
--------------
M
P
E
V
G
Q
R
L
R
V
G
G
M
V
--------------
M
P
-
G
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Q
R
-
D
P
-
N
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L
K
V
T
F
T
I
Y
-
D
A
---
E
G
S
----
V
D
----------------
V
-----
S
Y
E
G
--
I
L
P
D
-
L
F
------
R
E
---------------------------
G
----
Q
G
-
V
V
V
Q
G
E
L
E
K
G
-----------
N
H
I
L
A
K
E
---
V
L
A
--
K
H
D
E
N
Y
-------------------
T
P
P
E
V
E
K
A
M
-------
35
HHSearch
56.95
20%
-57.60
- C3 -
1GWY
2
ACTP2_STOHE
A:
[21-119]
-------------------------------------------------------------------------------------------------
L
E
E
L
G
K
-
V
S
R
K
I
A
V
G
I
D
-
N
E
---
S
G
G
----
T
W
----------------
T
A
L
--
N
A
Y
F
R
SG
T
T
D
V
-
I
L
------
P
E
F
V
P
N
T
-
K
A
L
L
Y
S
G
R
K
D
T
G
-----
P
V
A
T
G
----
A
V
-
A
A
F
A
Y
Y
M
S
S
G
N
----
T
L
G
V
--
M
F
S
V
P
F
D
---
Y
N
--------
W
-
Y
S
N
W
--
W
D
-
V
-------
K
I
---------------
30
Fugue
55.52
16%
-63.18
- C2 -
1NYC
3
SSPC_STAAW
A:
[1-111]
-------------------G
S
M
Y
Q
L
Q
F
I
N
L
V
Y
------------
D
T
T
K
L
T
--------------
H
L
E
Q
T
N
I
N
L
F
I
G
N
W
-
S
N
H
Q
---------
L
Q
-
K
S
I
C
I
R
H
G
-
D
D
---------------------------------------
T
S
H
--
N
Q
Y
H
I
--
L
F
I
D
-
T
A
------
H
Q
----
R
-
I
---------
K
F
-----
S
S
F
D
N
----
E
E
-
I
I
Y
I
L
D
Y
D
D
T
Q
----
H
I
L
M
--
Q
T
S
S
K
Q
G
---
I
G
T
--
S
R
P
I
V
Y
E
R
L
V
-------------------------------
3
PsiBlast
55.40
28%
-47.53
* C4 *
1TQJ
-
RPE_SYNY3
A:
[160-214]
-------------------------------------------------------------------
I
R
A
L
R
Q
M
C
D
E
R
-
G
L
D
P
WI
E
V
D
G
G
L
K
P
N
-
N
T
W
Q
V
L
E
A
-------------
G
---
A
N
A
----
I
V
----------------
A
G
S
--
A
V
F
N
A
-----
P
-
N
Y
------
A
E
A
I
--------------------------------------------------------------------------------------------------------------
28
Fugue
54.14
13%
-65.56
- C2 -
1LM0
-
CCME_SHEON
A:
[7-107]
---------------------
S
N
L
N
L
F
Y
T
--------
P
S
E
I
V
N
G
K
T
D
T
G
V
--------------
K
P
E
A
G
Q
R
I
R
V
G
G
M
V
-
T
V
G
S
--
M
V
R
D
P
N
S
L
H
-
V
Q
F
A
V
H
D
S
-
L
G
G
E
I
L
V
T
Y
D
-
D
-----------------------------------------
L
L
P
D
-
L
F
------
R
E
---------------------------
G
----
Q
G
-
I
V
A
Q
G
V
L
G
E
D
G
----
K
L
A
A
--
T
E
V
L
A
K
H
---
D
---------------------------------------------
31
HHSearch
53.99
19%
-15.69
- C2 -
1Q5L
1
A:
[66-120]
-------------------------------------------------------------------------------------------------------------------------------
I
H
----------------
V
L
Q
--
G
E
R
K
R
--
A
A
D
N
-
K
S
------
L
G
Q
F
N
L
D
-
G
---------
I
N
-----
P
A
P
R
G
----
M
P
Q
I
E
V
T
F
D
I
D
A
D
G
----
I
L
H
V
--
S
A
K
D
K
N
--------------------------------------------------
1
PsiBlast
52.42
33%
-5.33
* C7 *
2J5W
1
CERU_HUMAN
A:
[43-110]
--------------------------------------------------------------------------------------------------
K
L
I
S
V
-
D
T
E
H
S
N
I
Y
L
Q
-
N
G
---
P
D
R
----
I
G
----------------
R
L
Y
K
K
A
L
Y
L
Q
--
Y
T
D
E
-
T
F
------
R
T
T
I
E
K
P
-
V
---------
W
L
-----
G
F
L
-------
G
-
P
I
I
K
A
E
T
G
D
K
V
----
Y
V
H
L
--
K
-------------------------------------------------------
9
PsiBlast
51.55
27%
-33.48
- C5 -
2CZV
4
RNP3_PYRHO
A:
[81-173]
---------------------------------------------------------------------------------------------------
V
E
S
N
-
D
L
R
V
I
R
Y
S
I
E
-
K
G
---
V
D
A
----
I
I
----------------
S
P
W
--
V
N
R
K
D
--
P
G
I
D
-
H
V
L
A
----
K
L
M
V
K
K
N
-
V
---------
A
L
G
F
S
L
R
P
L
L
Y
S
N
P
Y
E
R
A
-
N
L
L
R
F
M
M
K
A
W
K
----
L
V
E
---
K
Y
K
V
R
R
F
---
L
T
S
--
S
A
Q
E
K
W
-----------------------------------
48
SP3
51.52
12%
-94.97
- C3 -
1JMX
-
?
A:
[282-363]
------------------------------
G
K
A
R
L
L
A
V
Q
P
A
F
I
K
A
G
G
E
S
E
---------------
I
T
L
V
G
S
-----
G
L
-
A
G
K
P
--
D
L
G
A
G
V
E
----
V
T
E
V
L
E
Q
-
T
P
T
L
V
R
L
K
A
R
-
A
A
---
A
D
A
K
P
G
Q
R
E
----------------
V
A
V
--
G
T
L
----------------------
K
G
-
V
---------
N
L
-----
A
V
Y
D
-------------------------------------------------------------------------------------
43
HHSearch
51.41
16%
-97.34
- C2 -
3LHN
3
?
A:
[27-114]
-----------------------------------------------------------------
L
D
W
P
G
V
Y
E
G
V
L
P
C
-
A
S
C
E
--
G
I
Q
T
T
-------
L
-
T
L
Q
A
-
D
N
S
F
E
L
K
S
I
Y
L
G
K
---
D
E
S
----
I
F
----------------
K
V
A
--
G
K
F
D
W
--
D
S
N
G
S
K
I
------
T
------------------
L
-----
S
---
D
--------
G
S
K
Y
L
V
-
G
E
N
----
Q
L
L
M
--
L
-----
D
---
T
E
G
--
N
R
I
T
G
G
-----------------------------------
2
PsiBlast
50.98
33%
-7.47
- C7 -
1KCW
-
CERU_HUMAN
A:
[24-91]
--------------------------------------------------------------------------------------------------
K
L
I
S
V
-
D
T
E
H
S
N
I
Y
L
Q
-
N
G
---
P
D
R
----
I
G
----------------
R
L
Y
K
K
A
L
Y
L
Q
--
Y
T
D
E
-
T
F
------
R
T
T
I
E
K
P
-
V
---------
W
L
-----
G
F
L
-------
G
-
P
I
I
K
A
E
T
G
D
K
V
----
Y
V
H
L
--
K
-------------------------------------------------------
29
Fugue
50.97
12%
-66.27
- C3 -
2PN7
-
GGCT_HUMAN
A:
[14-182]
---------------------
E
E
S
F
L
Y
F
A
Y
G
S
N
L
L
T
E
R
I
H
L
R
N
P
S
A
A
F
F
C
--------------
V
A
R
L
Q
D
F
K
L
D
F
G
N
S
-
Q
G
K
T
--
S
Q
T
---
W
H
G
-
G
I
A
T
I
F
Q
S
-
P
G
D
E
V
W
G
V
V
W
-
K
M
---
N
K
S
----
N
L
----------------
N
S
L
--
D
E
Q
E
G
--
V
K
S
G
-
M
Y
-------
V
V
I
E
V
K
-
V
---------
A
T
-----
Q
E
-
G
K
----
E
I
-
T
C
R
S
Y
L
M
T
N
Y
E
S
A
P
P
S
P
Q
Y
--
K
K
I
I
C
M
G
---
A
K
E
--
N
G
L
P
L
E
Y
Q
E
K
L
--
K
A
-
I
E
P
N
DYTG
K
V
S
E
E
I
E
D
I
I
K
K
-----
51
SP3
50.46
9%
-30.22
- C3 -
2HFT
-
?
?:
[107-218]
----------------------------------------------------------------------------------------
N
L
G
Q
P
---
T
I
Q
S
F
E
Q
-
V
G
T
K
V
N
V
T
V
--
E
D
---
E
R
T
----
L
V
----------------
R
R
N
--
N
T
F
----
L
S
----
L
------
R
D
V
F
G
K
D
-
L
---------
I
Y
-----
T
L
Y
Y
W
----
K
S
-
S
G
K
K
T
A
K
T
N
T
N
----------
E
F
L
I
--
D
---
V
D
K
--
G
E
N
Y
C
F
S
V
Q
A
V
IP
S
R
---------
T
V
N
R
K
S
T
D
S
P
V
E
C
M
G--
8
PsiBlast
49.04
27%
-30.93
- C5 -
1V77
-
RNP3_PYRHO
A:
[81-173]
---------------------------------------------------------------------------------------------------
V
E
S
N
-
D
L
R
V
I
R
Y
S
I
E
-
K
G
---
V
D
A
----
I
I
----------------
S
P
W
--
V
N
R
K
D
--
P
G
I
D
-
H
V
L
A
----
K
L
M
V
K
K
N
-
V
---------
A
L
G
F
S
L
R
P
L
L
Y
S
N
P
Y
E
R
A
-
N
L
L
R
F
M
M
K
A
W
K
----
L
V
E
---
K
Y
K
V
R
R
F
---
L
T
S
--
S
A
Q
E
K
W
-----------------------------------
45
SP3
48.62
13%
-10.95
* C3 *
1IM3
-
US02_HCMVA
D:
[1-95]
----------------------------------------------
P
W
F
Q
--------------
I
E
D
N
R
-----
C
Y
--------------
I
D
N
G
-
K
L
F
A
R
G
S
I
-
V
G
N
M
S
R
F
V
F
D
-
P
K
---
A
D
Y
-----------------------
G
---
G
V
G
E
N
--
L
Y
V
H
---------
A
D
D
V
E
-------------
F
V
-----
P
---------
G
-
E
S
L
K
W
N
V
R
N
L
D
----
V
M
P
I
FE
T
L
A
L
R
L
V
---
L
Q
G
--
D
V
I
-------
W
--
L
R
-
C
--------
V
P
E
L
------------
32
HHSearch
46.61
20%
-10.35
- C2 -
2Z4I
1
NLPE_ECOLI
A:
[21-123]
-------------------------------------------------------------------
M
P
Q
S
W
R
G
V
L
P
C
-
A
D
C
E
--
G
I
E
T
S
-------
L
-
F
L
E
K
-
D
G
T
W
V
M
N
E
R
Y
-
L
G
ARE
E
P
S
----
S
F
----------------
A
S
Y
--
G
T
W
A
R
--
T
A
D
--
K
L
------------------------
V
L
-----
T
--
D
S
----
K
G
-
E
K
S
Y
Y
R
A
K
G
D
A
----
L
E
M
L
--------
D
---
R
E
G
--
N
P
I
E
S
Q
F
N
Y
T
L
--
E
A
-
A
-------
Q
S
S
L
P
------------
6
PsiBlast
44.73
25%
16.90
- C5 -
1FP2
2
7OMT8_MEDSA
A:
[217-333]
-----------------------------------------------------------------------------
V
-
F
D
R
P
--
Q
V
V
E
N
L
S
G
S
-
N
N
L
T
Y
V
G
G
-
D
----
M
F
T
S
I
-
P
N
---
A
D
A
----
V
L
----------------
L
K
Y
--
I
L
H
N
W
--
T
D
K
D
-
C
L
R
I
L
K
K
C
K
E
A
V
T
N
D
-
G
---------
K
R
-----
G
K
V
T
I
----
I
D
-
M
V
I
D
K
K
K
D
E
N
Q
----
V
T
Q
I
--
K
L
L
M
D
V
N
MAC
L
N
G
--
K
E
R
N
E
---
E
E
W
--
K
K
-
L
-------
F
I
E
A
G
F
-----------
User Run . : Multi Template Modeling Result:
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160...
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MKKLYFFTMLSIMLLAVTGAMAQKKTKFKAADLKGIWQLCHYVSESPDVPGALKPSNTFKVLSDDGRIVNFTIIPGADAIITGYGTYKQLTDDSYKESIEKNIHLPMLDNQDNILEFEIKDNDYLHLKYFIKSDLNGNELNTWYYETWKRVEMPAKFPEDIVR
65
75.77
100%
-11.28
- C- -
M065
-
A:
[3-167]
M
K
K
L
Y
F
F
T
M
L
S
I
M
L
L
A
V
T
G
A
M
A
Q
K
K
T
K
F
K
A
A
D
L
K
G
I
W
Q
L
C
H
Y
V
S
E
S
P
D
V
P
G
A
L
K
P
S
N
T
F
K
V
L
S
D
D
G
R
I
V
N
F
T
I
I
P
G
A
D
A
I
I
T
G
Y
G
T
Y
K
Q
L
T
D
D
S
Y
K
E
S
I
E
K
N
I
H
L
P
M
L
D
N
Q
D
N
I
L
E
F
E
I
K
D
N
D
Y
L
H
L
K
Y
F
I
K
S
D
L
N
G
N
E
L
N
T
W
Y
Y
E
T
W
K
R
V
E
M
P
A
K
F
P
E
D
I
V
R
72
68.10
100%
-4.44
- C- -
M072
-
A:
[3-167]
M
K
K
L
Y
F
F
T
M
L
S
I
M
L
L
A
V
T
G
A
M
A
Q
K
K
T
K
F
K
A
A
D
L
K
G
I
W
Q
L
C
H
Y
V
S
E
S
P
D
V
P
G
A
L
K
P
S
N
T
F
K
V
L
S
D
D
G
R
I
V
N
F
T
I
I
P
G
A
D
A
I
I
T
G
Y
G
T
Y
K
Q
L
T
D
D
S
Y
K
E
S
I
E
K
N
I
H
L
P
M
L
D
N
Q
D
N
I
L
E
F
E
I
K
D
N
D
Y
L
H
L
K
Y
F
I
K
S
D
L
N
G
N
E
L
N
T
W
Y
Y
E
T
W
K
R
V
E
M
P
A
K
F
P
E
D
I
V
R
73
56.55
100%
-16.51
- C- -
M073
-
A:
[3-165]
M
K
K
L
Y
F
F
T
M
L
S
I
M
L
L
A
V
T
G
A
M
A
Q
K
K
T
K
F
K
A
A
D
L
K
G
I
W
Q
L
C
H
Y
V
S
E
S
P
-------
P
S
N
T
F
K
V
L
S
D
D
G
R
I
V
N
F
T
I
I
P
G
A
D
A
I
I
T
G
Y
G
T
Y
K
Q
L
T
D
D
S
Y
K
E
S
I
E
K
N
I
H
L
P
M
L
D
N
Q
D
N
I
L
E
F
E
I
K
D
N
D
Y
L
H
L
K
Y
F
I
K
S
D
L
N
G
N
E
L
N
T
W
Y
Y
E
T
W
K
R
V
E
M
P
A
K
F
P
E
D
I
V
R
56
42.51
100%
-7.06
- C- -
M056
-
A:
[3-165]
M
K
K
L
Y
F
F
T
M
L
S
I
M
L
L
A
V
T
G
A
M
A
Q
K
K
T
K
F
K
A
A
D
L
K
G
I
W
Q
L
C
H
Y
V
S
E
S
P
D
V
P
G
A
L
K
P
S
N
T
F
K
V
L
S
D
D
G
R
I
V
N
F
T
I
I
P
G
A
D
A
I
I
T
G
Y
G
T
Y
K
Q
L
T
D
D
S
Y
K
E
S
I
E
K
N
I
H
L
P
M
L
D
N
Q
D
N
I
L
E
F
E
I
K
D
N
D
Y
L
H
L
K
Y
F
I
K
S
D
L
N
G
N
E
L
N
T
W
Y
Y
E
T
W
K
R
V
E
M
P
A
K
F
P
E
D
I
V
R
67
31.18
100%
36.91
- C- -
M067
-
A:
[13-161]
M
K
K
L
Y
F
F
T
M
L
S
------------
K
K
T
K
F
K
A
A
D
L
K
G
I
W
Q
L
C
H
Y
V
S
E
S
P
D
V
P
G
A
L
K
P
S
N
T
F
K
V
L
S
D
D
G
R
I
V
N
F
T
I
I
P
G
A
D
A
I
I
T
G
Y
G
T
Y
K
Q
L
T
D
D
S
Y
K
E
S
I
E
K
N
I
H
L
P
M
L
D
N
Q
D
N
I
L
E
F
E
I
K
D
N
D
Y
L
H
L
K
Y
F
I
K
S
D
L
N
G
N
E
L
N
T
W
Y
Y
E
T
W
K
R
V
E
M
P
A
K
-------