@tome V2.1
Ref.
-
-
Doc.
Global output mode :
Group entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Selected Ligands Contact
Catalytic Site Atlas
Show alignment :
Best alignments
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
Structural Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Modeller Score
Verify3D Model Score
QMean Model Score
Hide column
Complexes Prediction
Show Ligands of Templates
Comparative Docking Score
Virtual Screening Score
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Comparative Docking Tab
Atome Color :
Mutated
Helix
Strand
Conserved
Query sequence : >T0711: (2012-06-12 )
GCPQGRGDWAPTSCSQDSDCLAGCVCGPNGFCG
Atome Classification :
.........10........20........30........
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
------GCPQGRGDWAPTSCSQDSDCLAGCVCGPNGFCG
43
SP3
87.73
45%
-196.04
- C5 -
1LU0
3
ITR1_CUCMA
A:
[1-29]
-----R
V
C
P
R
-----
I
L
L
E
C
K
K
D
S
D
C
L
A
E
C
V
C
L
E
H
G
Y
C
G
33
Fugue
86.73
71%
-172.45
* C5 *
1MCV
-
?
I:
[1-28]
------
P
C
T
L
E
Y
-----
M
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
21
HHSearch
83.78
83%
-177.02
- C5 -
1H9H
-
ITR2_ECBEL
I:
[6-28]
----------------
L
I
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
22
HHSearch
83.26
70%
-193.86
- C5 -
1H9I
-
ITR2_ECBEL
I:
[6-28]
----------------
L
I
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
T
N
N
K
F
C
G
2
PsiBlast
82.41
85%
-200.84
- C5 -
2C4B
13
RNBR_BACAM
B:
[122-142]
------------------
K
C
R
R
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
24
HHSearch
81.98
78%
-169.78
- C5 -
2C4B
14
ITR2_ECBEL (first)
A:
[120-142]
----------------
L
K
K
C
R
R
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
4
PsiBlast
81.87
86%
-178.64
- C5 -
1W7Z
1
ITR2_ECBEL
A:
[7-28]
-----------------
I
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
7
PsiBlast
81.21
86%
-193.20
- C5 -
2IT7
-
ITR2_ECBEL
A:
[7-28]
-----------------
M
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
9
PsiBlast
80.40
57%
-189.18
- C5 -
1H9I
-
ITR2_ECBEL
I:
[1-28]
------
G
C
P
R
-----
I
L
I
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
T
N
N
K
F
C
G
3
PsiBlast
79.88
86%
-201.73
- C5 -
1MCV
-
?
I:
[7-28]
-----------------
M
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
1
PsiBlast
78.52
85%
-178.84
- C5 -
2C4B
14
ITR2_ECBEL (first)
A:
[122-142]
------------------
K
C
R
R
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
6
PsiBlast
76.77
86%
-152.87
- C5 -
2ETI
-
ITR2_ECBEL
A:
[7-28]
-----------------
M
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
23
HHSearch
76.49
59%
-200.93
- C5 -
1LU0
2
ITR1_CUCMA
A:
[8-29]
-----------------
L
E
C
K
K
D
S
D
C
L
A
E
C
V
C
L
E
H
G
Y
C
G
5
PsiBlast
74.40
86%
-182.90
- C5 -
2LET
-
ITR2_ECBEL
A:
[7-28]
-----------------
M
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
8
PsiBlast
69.11
81%
-190.45
- C5 -
1H9H
-
ITR2_ECBEL
I:
[7-27]
-----------------
I
R
C
K
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
-
26
HHSearch
68.10
52%
-193.74
- C5 -
1MCT
-
ITRA_MOMCH
I:
[8-28]
-----------------
M
E
C
T
R
D
S
D
C
M
A
K
C
I
C
V
-
A
G
H
C
G
25
HHSearch
67.92
50%
-208.00
- C5 -
2PO8
-
ITR2_MOMCO
A:
[6-27]
-----------------
K
K
C
R
R
D
S
D
C
P
G
A
C
I
C
R
G
N
G
Y
C
G
34
Fugue
66.09
46%
-140.54
- C5 -
1HA9
-
ITR2_MOMCO
A:
[1-34]
SGSDGG
V
C
P
K
-----
I
L
K
K
C
R
R
D
S
D
C
P
G
A
C
I
C
R
G
N
G
Y
C
G
18
PsiBlast
60.53
54%
-190.85
- C5 -
2STB
-
ITR3_CUCPE
I:
[8-29]
-----------------
M
E
C
K
K
D
S
D
C
L
A
E
C
I
C
L
E
H
G
Y
C
G
15
PsiBlast
58.49
59%
-200.93
- C5 -
1LU0
2
ITR1_CUCMA
A:
[8-29]
-----------------
L
E
C
K
K
D
S
D
C
L
A
E
C
V
C
L
E
H
G
Y
C
G
User Run . : Multi Template Modeling Result:
.........10........20........30...
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
GCPQGRGDWAPTSCSQDSDCLAGCVCGPNGFCG
58
100.00
100%
?
- C- -
M058
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
57
100.00
100%
?
- C- -
M057
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
55
100.00
100%
?
- C- -
M055
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
53
100.00
100%
?
- C- -
M053
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
60
88.08
100%
-219.58
- C- -
M060
-
A:
[12-33]
-----------
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
59
83.87
100%
-195.61
- C- -
M059
-
A:
[12-33]
-----------
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
63
83.38
100%
-211.25
- C- -
M063
-
A:
[12-33]
-----------
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
62
82.92
100%
-217.17
- C- -
M062
-
A:
[12-33]
-----------
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
64
82.74
100%
-212.84
- C- -
M064
-
A:
[12-33]
-----------
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
61
82.14
100%
-201.95
- C- -
M061
-
A:
[12-33]
-----------
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
70
54.23
100%
-85.27
- C- -
M070
-
A:
[6-33]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
68
54.23
100%
-106.99
- C- -
M068
-
A:
[6-33]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
67
52.94
100%
-98.26
- C- -
M067
-
A:
[6-33]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
66
51.23
100%
-74.63
- C- -
M066
-
A:
[6-33]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
74
50.73
100%
-66.02
- C- -
M074
-
A:
[6-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
72
48.13
100%
-80.20
- C- -
M072
-
A:
[6-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
65
46.41
100%
-71.39
- C- -
M065
-
A:
[6-33]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
69
46.32
100%
-73.11
- C- -
M069
-
A:
[6-33]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
75
45.10
100%
-13.95
- C- -
M075
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
76
39.81
100%
-13.29
- C- -
M076
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
73
33.71
100%
1.92
- C- -
M073
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
54
31.66
100%
-9.92
- C- -
M054
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
71
27.92
100%
1.71
- C- -
M071
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G
56
26.30
100%
10.47
- C- -
M056
-
A:
[4-34]
G
C
P
Q
G
R
G
D
W
A
P
T
S
C
S
Q
D
S
D
C
L
A
G
C
V
C
G
P
N
G
F
C
G