Study : T0699 (models@predictioncenter.org)


Main Binding Site Prediction:


Binding Site Prediction

Download fasta file
Download text file


Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [Kd < -3] : 5 (5 maxi)

Complexes [Theoretical Kd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: MW5_A_2(2YC3) / Model_39(2YC3/A) = [-7.2] Download--MIDGKFISAIITAAGSGLRMRSKINKPYIEVGGRKVLEITLDTVSRVKEIDEIILVIRKDDEDIIKDILEKYDGNIRYVYGSTTRELSTFEGLKALDPQSELVLTHDGVRPFASEELFLKTINALRKNKAVITATKSKDTVKIIDDDMYVDFTPNRDYVYNIQTPQAFDKKLIYAMYEKYLASEFKVTDDSQLFEFFDRDEKVKVVHGEYSNIKITTQEDIIFANAYLQRKKDV
Complex: MW5_A_2(2YC3) / Model_3(2YC5/A) = [-7.1] Download--MIDGKFISAIITAAGSGLRMRSKINKPYIEVGGRKVLEITLDTVSRVKEIDEIILVIRKDDEDIIKDILEKYDGNIRYVYGSTTRELSTFEGLKALDPQSELVLTHDGVRPFASEELFLKTINALRKNKAVITATKSKDTVKIIDDDMYVDFTPNRDYVYNIQTPQAFDKKLIYAMYEKYLASEFKVTDDSQLFEFFDRDEKVKVVHGEYSNIKITTQEDIIFANAYLQRKKDV
Complex: CDM_E_5(1INI) / Model_21(1INI/A) = [-6.4] Download--MIDGKFISAIITAAGSGLRMRSKINKPYIEVGGRKVLEITLDTVSRVKEIDEIILVIRKDDEDIIKDILEKYDGNIRYVYGSTTRELSTFEGLKALDPQSELVLTHDGVRPFASEELFLKTINALRKNKAVITATKSKDTVKIIDDDMYVDFTPNRDYVYNIQTPQAFDKKLIYAMYEKYLASEFKVTDDSQLFEFFDRDEKVKVVHGEYSNIKITTQEDIIFANAYLQRKKDV
Complex: CDM_A_3(3Q80) / Model_40(3Q80/A) = [-6.2] Download--MIDGKFISAIITAAGSGLRMRSKINKPYIEVGGRKVLEITLDTVSRVKEIDEIILVIRKDDEDIIKDILEKYDGNIRYVYGSTTRELSTFEGLKALDPQSELVLTHDGVRPFASEELFLKTINALRKNKAVITATKSKDTVKIIDDDMYVDFTPNRDYVYNIQTPQAFDKKLIYAMYEKYLASEFKVTDDSQLFEFFDRDEKVKVVHGEYSNIKITTQEDIIFANAYLQRKKDV
Complex: CDM_A_3(3Q80) / Model_21(1INI/A) = [-6.0] Download--MIDGKFISAIITAAGSGLRMRSKINKPYIEVGGRKVLEITLDTVSRVKEIDEIILVIRKDDEDIIKDILEKYDGNIRYVYGSTTRELSTFEGLKALDPQSELVLTHDGVRPFASEELFLKTINALRKNKAVITATKSKDTVKIIDDDMYVDFTPNRDYVYNIQTPQAFDKKLIYAMYEKYLASEFKVTDDSQLFEFFDRDEKVKVVHGEYSNIKITTQEDIIFANAYLQRKKDV
Consensus
[Kd Mean = -6.58]
-0
(s=0)
0
(s=0)
MIDGKFISAIITAAGSGLRMRSKINKPYIEVGGRKVLEITLDTVSRVKEIDEIILVIRKDDEDIIKDILEKYDGNIRYVYGSTTRELSTFEGLKALDPQSELVLTHDGVRPFASEELFLKTINALRKNKAVITATKSKDTVKIIDDDMYVDFTPNRDYVYNIQTPQAFDKKLIYAMYEKYLASEFKVTDDSQLFEFFDRDEKVKVVHGEYSNIKITTQEDIIFANAYLQRKKDV