@TOME V2.2
(Nov 2016)
Ref.
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : T0759: (2014-05-01 )
MGHHHHHHSHMVVIHPDPGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAHYDRYVNKDMSIQELAVLVSGQK
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....---.....---10-----------...------..---------.---..-------20......-------------------.-.--30--..--------------------------..------....-----.40..--...--...50...-------------......-----60.--..--------.....70--------...--------------......80.--------------.....--.---------------.90-...----------...----------.--.--.100-..--...--...---------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGHH---HHHH
S
---
H
M
-----------
V
V
I
------HP---------D---PG-------REL
S
P
E
E
A
-------------------
H
-R--A---GL--------------------------ID------W
N
M
F
-----
V
K
L
RS--QEC--DW
E
E
-
I
S
V
-------------KGPNGE-----SS
V
--
I
H--------DRKSGK---------KF
S
--------------
I
E
E
A
L
Q
SGR--------------L
T
P
A
H
--
Y
---------------
D
R
--YVN----------KDM----------
S
--
I
--
Q
E
L
--
A
V
--
L
VS--GQK---------------------------------------------------------------------------------------------------------
20
SP3
74.78
21%
-42
- C3 -
1H3Q
-
TPPC2_MOUSE
A:
[1-140]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
S
G
S
F
Y
F
V
I
V
G
H
H
---
D
N
P
V
F
---
E
M
-----------
E
F
L
P
PGKAE
S
K
---------
D
---
D
H
-------
R
H
L
N
Q
F
I
A
-------------------
H
A
A
--
L
---
D
L
--------------------------
V
D
ENMWLS
N
N
M
Y
-----
L
K
T
V
D
--
K
F
N
--
E
W
F
V
-
S
A
F
-------------
V
T
A
G
H
M
-----
R
F
I
--
M
L
H
-------
D
V
R
Q
-----------------------------
E
D
G
I
K
N
----------------
F
F
T
D
V
--
Y
---------------
D
L
--
Y
I
K
F
A
M
NPFYEPN
S
P
I
----------
R
--
S
--
S
A
F
--
D
R
--
K
V
Q
F
L
G
K
K
H
LLS-----------------------------------------------------------------------------------------------------
15
SP3
74.78
14%
-21
- C3 -
1LM7
-
DESP_HUMAN
A:
[2209-2448]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFQGIR
Q
P
V
T
V
T
E
L
V
D
S
GILR
P
S
T
V
N
E
L
E
S
G
S
Y
---
D
E
V
G
E
---
R
I
KDFLQGSSCIA
G
I
Y
------
N
E
---------
T
---
T
K
-------
Q
K
L
G
I
Y
E
A
-------------------
M
-
K
--
I
---
G
L
--------------------------
V
R
------
P
G
T
A
-----
L
E
L
L
E
--
A
Q
-------------------------
A
A
T
G
F
----------
I
V
--------
D
P
V
S
N
L
---------
R
L
P
--------------
V
E
E
A
Y
K
R
G
L
--------------
V
G
I
E
F
--
K
---------------
E
K
--
L
L
S
----------
A
E
R
----------
A
--
V
--
T
G
Y
--
N
D
--
P
E
T
--
G
N
I
IS
L
F
Q
A
M
N
K
ELIE
K
G
H
G
I
R
L
L
E
A
Q
I
A
T
GGIIDPKES
H
R
L
P
V
D
I
A
Y
K
R
GYFN
E
E
L
S
E
I
L
S
D
PSDDTKGFFDPNTE
E
N
L
T
Y
L
Q
L
K
E
R
C
I
K
D
EETGL
C
L
L
P
L
K
E----
16
SP3
70.50
15%
-17
- C3 -
1LM5
-
DESP_HUMAN
A:
[2616-2811]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
S
---
P
I
A----------
A
I
F
------
D
T
---------
E
---
N
L
-------
E
K
I
S
I
T
E
G
-------------------
I
-
E
--
R
---
G
I
--------------------------
V
D
------
S
I
T
G
-----
Q
R
L
L
E
--
A
Q
-------------------------
A
C
T
G
G
----------
I
I
--------
H
P
T
T
G
Q
---------
K
L
S
--------------
L
Q
D
A
V
S
Q
G
V
--------------
I
D
Q
D
M
--
A
---------------
T
R
--
L
K
P
A
Q
K
A
F
IG---
F
K
M
----------
S
--
A
--
A
E
A
--
V
K
E
K
W
L
P
--
Y
E
A
G
Q
R
F
L
E
F
Q
Y
L
T
GGLVDPEVH
G
R
I
S
T
E
E
A
I
R
K
GFID
G
R
A
A
Q
R
L
Q
D
TSSYAKILTCPKTKLKIS
Y
K
D
A
I
N
R
S
M
V
E
DITG
L
R
L
L
E
A
A
SVSSK----------------
25
HHSearch
67.11
20%
-35
- C3 -
1LM5
-
DESP_HUMAN
A:
[2620-2689]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
-----------
A
I
F
------
D
T
---------
E
---
N
L
-------
E
K
I
S
I
T
E
G
-------------------
I
-
E
--
R
---
G
I
--------------------------
V
D
------
S
I
T
G
-----
Q
R
L
L
E
A
-
Q
A
C
----------------------------------
T
G
G
--
I
I
--------
H
P
T
T
G
Q
---------
K
L
S
--------------
L
Q
D
A
V
S
Q
G
V
--------------
I
D
Q
D
M
--
A
---------------
T
R
--
L
K
--------------------------------------------------------------------------------------------------------------------------------------------------------
5
Fugue
67.03
15%
-22
- C3 -
1LM5
-
DESP_HUMAN
A:
[2616-2811]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
S
P
---
I
A
-----------
A
I
F
------
D
T
---------
E
---
N
L
-------
E
K
I
S
I
T
E
G
-------------------
I
-
E
--
R
---
G
I
--------------------------
V
D
------
S
I
T
G
-----
Q
R
L
L
E
--
A
Q
A
----------------------------
C
-----
T
G
G
--
I
I
--------
H
P
T
T
G
Q
---------
K
L
S
--------------
L
Q
D
A
V
S
Q
G
V
--------------
I
D
Q
D
M
--
A
---------------
T
R
--
L
K
P
----------
A
Q
K
----------
A
--
F
--
I
G
F
-------------
K
MS
A
A
E
A
V
K
E
KWLP
Y
E
A
G
Q
R
F
L
E
F
Q
Y
L
T
GGLVDPEVH
G
R
I
S
T
E
E
A
I
R
K
GFID
G
R
A
A
Q
R
L
Q
D
TSSYAKILTCPKTKLKIS
Y
K
D
A
I
N
R
S
M
V
E
DITG
L
R
L
L
E
A
A
SVSSK
27
HHSearch
66.36
22%
-40
- C3 -
1LM7
-
DESP_HUMAN
A:
[2263-2327]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
------
N
E
---------
T
---
T
K
-------
Q
K
L
G
I
Y
E
A
-------------------
M
-
K
--
I
---
G
L
--------------------------
V
R
------
P
G
T
A
-----
L
E
L
L
E
--
A
Q
---------
A
A
-------------
T
G
-----------
F
--
I
V
--------
D
P
V
S
N
L
---------
R
L
P
--------------
V
E
E
A
Y
K
R
G
L
--------------
V
G
I
E
F
--
K
---------------
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------
21
SP3
65.71
19%
-50
- C3 -
1S4Q
3
KGUA_MYCTU
A:
[22-204]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
G
---------
R
---
V
V
-----------
V
L
S
------
G
P
---------
S
A--
V
G
-------
K
S
-
T
V
V
R
C
-------------------
L
-
R
--
E
---
R
I
P
NLHF
S
V
S
A
T
T
R
A
P
R
PGEVDGVDYHF
I
D
------
P
T
R
F
-----
Q
Q
L
I
D
--
Q
G
E
LL
E
W
A
E
-
I
-----------------
H
G
G
L
-----
H
R
S
--
G
T
--------
L
A
Q
P
----------------------------
V
R
A
A
A
A
T
G
V
P
V
L
I
E
---------
V
D
L
A
G
--
A
---------------
R
A
--
I
K
K
----------
T
M
P
E
A
V
T
V
F
LAPP
S
--
W
--
Q
D
L
--
Q
A
--
R
L
I
--
G
R
G
TET
A
D
V
I
Q
R
R
L
D
T
A
R
I
E
L
A
A
QGDFD
K
V
V
V
NRR
L
E
S
A
C
A
E
L
V
S
L
L
V
G-----------------------------------------------------------
17
SP3
65.63
16%
-20
- C3 -
3LAD
2
DLDH_AZOVI
A:
[349-472]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
---
D
L
I
P
----
A
V
-----------
I
Y
T
------
H
P
---------
E
I
A
G
V
G
---------
K
T
E
Q
A
L
-------------------
K
-
A
--
E
---
G
---------------------------
V
A
------
I
N
V
G
V
----
F
P
F
A
A
--
S
G
-----
R
A
-
M
A
A
-------------
N
D
T
A
G
F
-----
V
K
V
--
I
A
--------
D
A
K
T
D
R
---------
V
L
G
V
H
V
I
GPS
A
A
E
L
V
Q
Q
G
A
I
A
M
E
F
G
---------------
T
S
A
E
D
--
L
---------------
G
M
M
V
F
A
H
----------
P
A
L
----------
S
E
A
L
--
H
E
A
--
A
L
--
A
V
S
--
G
H
A
IHVA-----------------------------------------------------------------------------------------------------
12
Fugue
64.09
30%
-18
- C3 -
2JV8
-
?
A:
[1-73]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
H
H
---
T
E
V
F
E
---
G
---------------------------------------------------------------------------------
G
T
--------------------------
I
D
------
I
E
---------------------
D
D
-
T
S
L
-------------
T
I
N
G
K
E
-----
I
S
Y
--
V
H
--------
D
A
V
K
N
K
------------------------------
W
S
S
R
Y
--------------
L
P
Y
T
Q
--
Y
---------------
D
S
--
L
L
D
----------
L
A
R
----------
A
--
I
--
I
R
D
--
T
V
--
E
F
S
--
G
V
K
EGS------------------------------------------------------------------------------------------------------
28
HHSearch
64.04
23%
-44
- C3 -
1LM7
-
DESP_HUMAN
A:
[2339-2400]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
N
------
D
P
---------
E
---
T
G
-------
N
I
I
S
L
F
Q
A
-------------------
M
-
N
--
K
---
E
L
--------------------------
I
E
------
K
G
H
G
-----
I
R
L
L
E
--
A
Q
--------
I
-
A
-------------
T
G
-----------
G
--
I
I
--------
D
P
K
E
S
H
---------
R
L
P
--------------
V
D
I
A
Y
K
R
G
Y
--------------
F
N
E
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
63.14
23%
-15
- C4 -
1T11
-
TIG_VIBCH
A:
[140-210]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
-----
E
T
L
R
K
--
Q
Q
A
--
T
W
K
E
-
V
D
E
-------------
A
A
E
N
G
K
-----
R
V
S
--
I
D
F
V
G
S
IDGV
E
F
E
G
G
K
---------
A
E
N
--------------
F
P
L
E
M
G
A
G
R
--------------
M
I
P
G
F
--
E
---------------
D
G
--
I
V
G
----------
K
T
K
----------
G
--
M
--
E
-------------------------------------------------------------------------------------------------------------------------
6
Fugue
62.80
13%
-21
- C3 -
1LM5
-
DESP_HUMAN
A:
[2616-2811]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
S
P
---
I
A
-----------
A
I
F
------
D
T
---------
E
---
N
L
-------
E
K
I
S
I
T
E
G
-------------------
I
-
E
--
R
---
G
I
--------------------------
V
D
------
S
I
T
G
-----
Q
R
L
L
E
--
A
Q
A
----------------------------
C
-----
T
G
G
--
I
I
--------
H
P
T
T
G
Q
---------
K
L
S
--------------
L
Q
D
A
V
S
Q
G
V
--------------
I
D
Q
D
M
--
A
---------------
T
R
--
L
K
P
----------
A
Q
K
----------
A
--
F
--
I
G
F
--
K
M
--
S
A
A
--
E
A
V
K
E
KWLP
Y
E
A
G
Q
R
F
L
E
F
Q
Y
L
T
GGLVDPEVH
G
R
I
S
T
E
E
A
I
R
K
GFID
G
R
A
A
Q
R
L
Q
D
TSSYAKILTCPKTKLKIS
Y
K
D
A
I
N
R
S
M
V
E
DITG
L
R
L
L
E
A
A
SVSSK-------
22
SP3
56.15
14%
-40
- C3 -
1C20
-
A:
[3-130]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWS
F
E
E
Q
F
K
Q
V
R
Q
L
Y
E
INDD
P
K
R
K
E
F
L
D
D
L
F
S
F
M
Q
K
R
---
G
T
P
I
N
---
R
L
-----------
P
I
M
------
A
---------------
K
-------
S
V
L
D
L
Y
E
L
-------------------
Y
-
N
--
L
----
V
--------------------------
I
A
------
R
G
G
L
-----
V
D
V
I
N
--
K
K
---
L
W
Q
E
-
I
-
I
-------------
K
G
L
H
L
P
-----
S
---------------
S
I
T
S
A
---------
A
F
T
--------------
L
R
T
Q
Y
M
K
Y
L
-----------------
Y
P
--
Y
---------------
E
C
--
E
K
K
----------
N
L
S
----------
T
--
P
--
A
E
L
--
Q
A
--
A
I
D
--
G
N
R
---------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
52.97
40%
-112
- C3 -
1LM5
-
DESP_HUMAN
A:
[2660-2689]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
I
------
H
P
---------
T
---
T
G
-------
Q
K
L
S
L
Q
D
A
-------------------
V
-
S
--
Q
---
G
V
--------------------------
I
D
------
Q
D
M
A
-----
T
R
L
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
SP3
49.89
11%
-13
- C3 -
1OJT
1
?
?:
[355-482]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
R
V
I
P
G
V
-----------
A
Y
T
------
S
P
---------
E
V
A
W
V
G
---------
E
T
E
L
S
A
-------------------
K
-
A
--
S
---
A
---------------------------
R
K
------
I
T
K
A
N
----
F
P
W
A
A
--
S
G
-----
R
A
-
I
A
N
-------------
G
C
D
K
P
F
-----
T
K
L
--
I
F
--------
D
A
E
T
G
R
II
G
G
G
I
V
G
P
N
G
G
DMI
G
E
---------
V
C
L
A
I
E
M
G
---------------
C
D
A
A
D
--
I
---------------
G
K
TI
H
P
H
----------
P
T
L
----------
G
E
S
I
--
G
M
A
--
A
E
--
V
A
L
--
G
T
C
TDLPPQKK-------------------------------------------------------------------------------------------------
10
Fugue
48.47
17%
-5
- C3 -
2TMD
-
DHTM_METME
A:
[490-645]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
W
N
T
D
G
T
N
---
C
L
T
H
D
---
P
I
-----------
P
G
A
------
D
A
---------
S
---
L
P
-------
D
Q
L
T
P
E
Q
V
M
D
GK
K
K
I
G
K
R
V
V
I
L
N
ADTY
F
-
M
--
A
---
P
S
--------------------------
L
A
------
E
K
L
A
T
A
GHE
V
T
I
V
S
GV
H
L
A
--
N
Y
M
H
-
F
T
L
-------------
E
Y
P
N
M
M
-----
R
R
L
--
H
E
--------
L
H
V
E
E
L
---------
G
D
H
--------------
F
C
S
R
I
E
P
G
R
--------------
M
E
I
Y
N
--
I
WGDGSKRTYRGPGVS
P
R
--
D
A
N
----------
T
S
H
----------
R
--
W
--
I
E
F
D
S
L
V
--
L
V
T
--
G
R
H
---------------------------------------------------------------------------------------------------------
8
Fugue
47.42
12%
-1
- C3 -
1WPI
-
FMP46_YEAST
A:
[1-133]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
F
W
KTL
Q
R
Q
P
R
---
T
I
-----------
S
L
F
------
T
N
---------
D
---
I
A
-------
S
N
I
K
S
Q
K
C
-------------------
L
-
Q
LL
K
---
G
D
--------------------------
V
S
------
H
R
F
D
-----
V
E
I
A
N
--
R
F
P
--
T
W
D
Q
-
L
Q
Y
M
R
T
S
C
PQ
G
P
V
S
L
Q
R
Q
I
P
K
L
-----
D
S
V
--
L
K
--------
Y
K
H
T
D
P
---------
T
F
G
MD------------
L
Q
K
C
V
Q
R
G
L
--------------
W
N
P
K
E
A
L
W
---------------
V
D
--
W
E
N
----------
K
L
V
----------
G
--
N
E
P
A
D
I
--
D
K
--
Y
I
I
--
Q
R
K
---------------------------------------------------------------------------------------------------------
38
HHSearch
45.75
13%
-38
- C3 -
1D9N
-
MBD1_HUMAN
A:
[10-62]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
--
L
G
P
--
G
W
K
R
-
R
E
V
-------------
F
R
K
S
G
A
TCGR
S
D
T
Y
--
Y
Q
--------
S
P
-
T
G
D
---------
R
I
R
--------------------------------------
S
K
V
E
--
L
---------------
T
R
--
Y
L
G
----------
P
A
C
----------
D
--
L
--
T
L
F
-----------------------------------------------------------------------------------------------------------------------
24
SP3
43.90
12%
-11
- C3 -
1F8F
2
?
A:
[4-371]
L
K
D
I
I
A
A
V
TPCKGA
D
F
E
L
Q
A
L
K
I
R
Q
P
Q
GD
E
V
L
V
KVV
A
T
G
M
C
H
T
D
L
I
V
R
D
QKYPVPLP
A
V
L
G
HE
G
S
G
I
I
EAIGPNVTELQVG
D
H
V
V
L
S
Y
G
Y
CGKC
T
Q
C
N
T
GNPAYCSEFFGRNFSGADSEGNHALCVNDHFFAQSSFAT
Y
A
L
S
R
ENN
T
V
K
V
T
KDVPIELLGPLGC
G
I
Q
T
G
A
G
A
C
I
NALKVTPA
S
S
F
V
T
W
G
AG
A
V
G
L
S
A
L
L
A
A
K
V
C
G
A
S
-----------
I
I
-----------
I
A
V
------
D
I
V
E
S
R
L
E
L
A
K
Q
---
L
G
AT
H
V
I
N
S
K
T
Q
D
P
V
A
A
-------------------
I
-
K
--
E
I
T
D
G
G
--------------------------
V
N
------
F
--
A
-----
L
E
S
T
G
--
S
P
E
--
I
L
K
Q
G
V
D
A
-------------
L
G
I
L
G
K
-----
I
A
V
V
G
A
P
--------
Q
L
G
T
T
A
---------
Q
F
D
--------------
V
N
D
L
L
L
G
G
K
T
I
L
G
V
V
EGSGS
P
K
K
F
I
P
E
L
--
V
---------------
R
L
--
Y
Q
Q
----------
G
K
F
----------
P
--
F
--
D
Q
L
--
V
K
--
F
Y
A
--
F
D
E
I
N
Q
A
A
I
D
S
R
K
GITL
K
P
I
I
K
I
A------------------------------------------------------------------------------------
30
HHSearch
40.39
26%
-42
- C3 -
1Y7O
-
CLPP_STRR6
A:
[190-208]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
---
R
D
-------
N
W
M
S
A
Q
E
T
-------------------
L
-
E
--
Y
---
G
F
--------------------------
I
D
------
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
User Run . : Multi Template Modeling Result:
(1 SA)
.........10........20........30........40........50........60........70........80........90........100.......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MGHHHHHH
S
H
M
V
V
I
HPDPGREL
S
P
E
E
A
H
RAGLIDW
N
M
F
V
K
L
RSQECDW
E
E
I
S
V
KGPNGESS
V
I
HDRKSGKKF
S
I
E
E
A
L
Q
SGRL
T
P
A
H
Y
D
R
YVNKDM
S
I
Q
E
L
A
V
L
VSGQK
53
38.44
100%
69
- C- -
M053
-
A:
[7-153]
M
G
H
H
H
H
H
H
S
H
M
V
V
I
H
P
D
P
G
R
E
L
S
P
E
E
A
H
R
A
G
L
I
D
W
N
M
F
V
K
L
R
S
Q
E
C
D
W
E
E
I
S
V
K
G
P
N
G
E
S
S
V
I
H
D
R
K
S
G
K
K
F
S
I
E
E
A
L
Q
S
G
R
L
T
P
A
H
Y
D
R
Y
V
N
K
D
M
S
I
Q
E
L
A
V
L
V
S
G
Q
K