@TOME V2.2
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : GLPT_HUMAN: (2015-12-08 )
MARLPAGIRFIISFSRDQWYRAFIFILTFLLYASFHLSRKPISIVKGELHKYCTAWDEADVRFSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFGMLASGAFTALFGLGYFYNIHSFGFYVVTQVINGLVQTTGWPSVVTCLGNWFGKGRRGLIMGVWNSHTSVGNILGSLIAGYWVSTCWGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKGYENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIHPNHVVILPGDGGSGTAAISFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNVDHLDAKKAGELSTLFDVGGIFGGILAGVISDRLEKRASTCGLMLLLAAPTLYIFSTVSKMGLEATIAMLLLSGALVSGPYTLITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGAALGPLLAGLLSPSGWSNVFYMLMFADACALLFLIRLIHKELSCPGSATGDQVPFKEQ

Atome Classification :

(20 SA) ---.........10.....---...20.....-...30........40.....-------------------...50........60........70........80........90........100.......110.......120.......130.---......140-.......----..150..-.....160-.......170----.......180.......190...-....200..---.....210..-.---------------------------...--.220.......230.......240.......250.......260........270.......280.......290.......300........310.......320.......330.......340.......350.....-.---.360.......370.......380.......390-..--...----....400.--......410.......420.......430.....---..440.......450.......460.......470....-...480......-.490.......500.......510.......520.......530.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---MARLPAGIRFIISFSR---DQWYRAFIFI-LTFLLYASFHLSRKPISIVK-------------------GELHKYCTAWDEADVRFSSQNRKSGSAAPHQLPDNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFG---MLASGAF---TALFGLG----YFYNIHS-FGFYVVTQ-VINGLVQTTG----WPSVVTCLGNWFGKGRRGLIMGV-WNSHTSVGN---ILGSLIAGYW-V---------------------------STC--WGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHSKG-YENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIH-PNHVVILPGDGGSGTAAISFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNV-D---HLDAKKAGELSTLFDVGGIFGGILAGVISDRL---EK--RAS----TCGLMLLL--AAPTLYIFSTVSKMGLEATIAMLLLSGALVSGPY---TLITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGA-ALGPLLAGLLSP-SGWSNVFYMLMFADACALLFLIRLIHKELSCPGSATGDQVPFKEQ
18 Fugue 91.7921%-113 - C2 -1PW4 - GLPT_ECOLI A:[5-451] -FKPAPHKARLPAAEIDPT---YRRLRWQIFL-GIFFGYAAYYLVRKNFALAM-------------------PYLV----------------------------------------EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAG---LILAAAV---MLFMGFV----PWAT-SS-IAVMFVLL-FLCGWFQGMG----WPPCGRTMVHWWSQKERGGIVSV-WNCAHNVGG---GIPPLLFLLG-M---------------------------AWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCG-----LPPIEE-YKNDTAKQIFMQYVLPN--------------------------------------------------KLLWYIAIANVFVYLLRYGILDWSPTYLKEV-K---HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV---FRGNRGA----TGVFFMTL--VTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPV---MLIGLHALELAP--KKAAGTAAGFTGLFGYLGGSVAASA-IVGYTVD----F-FGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP----
8 HHSearch 87.6719%-123 - C2 -1PW4 - GLPT_ECOLI A:[6-448] -----KPAPHKARLPAAEIDPTYRRLRWQIFL-GIFFGYAAYYLVRKNFALAM-------------------PYLV-E-----------------------------------QGFSR----GDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAG---LILAAAV---MLFMGFV----PWA-TSS-IAVMFVLL-FLCGWFQGMG----WPPCGRTMVHWWSQKERGGIVSV-WNCAHNVGG---GIPPLLFLLGMAW--------------------------FND--WHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND--------------------------------------------------------TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-K---HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV---FR--GNR----GATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPV---MLIGLHA-LELA-PKKAAGTAAGFTGLF------GYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP----
1 PsiBlast_PDB 76.3920%-118 - C2 -1PW4 - GLPT_ECOLI A:[75-438] --------------------------------------------------------------------------------------------------------------------------------------AYGFSKFIMGSVSDRSNPRVFLPAG---LILAAAV---MLFMGF-----VPWATSS-IAVMFVLL-FLCGWFQGMG----WPPCGRTMVHWWSQKERGGIVSV-WNCAHNVGGGIPPLLFLLGMAW-F---------------------------ND---WHAALYMPAFCAILVALFAFAMMRDTPQS--CGLPPIEEYKND-------------TAKQIF-------MQYVL----------PNKLLWY------------------------IAIANVFVYLLRYGILDWSPTYLKEV-K---HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR--GAT----GVFFMTLV--TIATIVYWMNPAGNPTVDMICMIVI-GFLIYGPV---MLIGLH-ALELAPKKA-AGTAAGFTGLFGYLGGSVAASA-IVGYTVDFF-----GWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP----
19 Fugue 63.3010%-104 - C2 -1PV6 - LACY_ECOLI A:[1-417] MYYLKNTNFWMFGLFFFFY---FFIMGAYFPF-FPIWLHDINHISKSDTGIIF-------------------AAISLFSLLFQPLFGLLSDKLGLR------------------------------KYLLWIITGMLVMFAPFFIFIFGPLLQYNILVG---SIVGGIY---LG------------FCFN-AGAPAVEA-FIEKVSRRSN----FE------------------FGR-ARMFGCVGW---ALGASIVGIM-F---------------------------TIN--NQFVFWLGSGCALILAVLLFFAKTDAPSSATVANA--------------------------------------------------------VGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSF-F---ATGEQGTRVFGYVTTMGELLNASIMFFAPLII---NR--I--------GGKNAL--LLAGTIMSVRIIGSSFATSALEVVILKTLHMFEV---PFLLVGCFKYITSQFEVRFSATIYLVCF---CFFKQLAM-IFMSVLAGNMYE-SIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA--
24 Fugue 60.2816% -48 - C2 -3J4Q - KAP2_MOUSE B:[9-394] ----GLTELLQGYTVEVLR---QQPPDLVDFA-VEYFTRLREARRQESDTFIVSPTTFHTQESSAVPVIEEDGESDSDSEDADLEVPVPSKFTRRVSVCAETFNPDEEEEDVVHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFEKIVKTDEH---VIDQGD--------------------DG-DNFYVIERGTYDILVTKDN----QTRSVGQYDNRGSFGELALMYNT-PRAATIIAT---SE-------------------------------------GSL--WGLD--------------------RVTFRRIIVKNNAKKRKM-FESFIESVPLFKSLEMSERMKIVDVI--------GEKIYK-DGERIIAQGEKAD-------------------------------------SFYIIES-G---EVSILIRSKTKSNKNGGN-------QEVEIAH---CH--KGQ----YFGELALV---------------------------------------------------TNKPRAASAYAVGDVKCLVMDVQAFER-LLGPCMDIMKRN-ISHYEEQLVKMFGSN------------------------------
12 HHSearch 58.3313% -94 - C2 -2CFQ - LACY_ECOLI A:[39-392] ------------------------------------------------------------------------------------------------------------------HISK----SDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAP---FFIFIF---------GPLLQYNILVGS-IVGGIYLGFCFNAGAPAVEAFIEKVS--RRSNFEFGR-ARMFGCVGW---ALGASIVGIM-F---------------------------TIN--NQFVFWLGSGCALILAVL-LFFAKTDAPSSATVAN-AV-------------------------GA-N-H------------S---------------AFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSF-FATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRI---GG--KNA----LLLAGTIM--SVRIIGS-SFA-T-SALEVVILKTLHMFEVPFLL---VGCFKYI-TSQF-EVRFSATIYLVCF-----CFFKQLAM-IFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA---
10 HHSearch 56.2617% -77 - C2 -2GFP - EMRD_ECOLI A:[38-359] -----------------------------------------------------------------------------------------------------------------LNVRE----GAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVG---MSIFMLA---TLVAVT---------TSS-LTVLIAAS-AMQGMGTGVG----GVMARTLPRDLYERTQLRHANSL-LNMGILVSP---LLAPLIGGLLDT---------------------------MWN--WRACYLFLLVLCAGVTFSMARWMPETRPVDA-----PR--T----------------------RL-L----------------------------------TSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAV-L---GLSSMTVSILFILPIPAAFFGAWFAGRPNKRF---ST--LMW----QSVICCLL--AGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLF---PLATSGA-MEPF-P-FLAGTAGALVG------GLQNIGS-GVLASLSAMLPQ-TGQGSLGLLMTLMGLLIVLCWLPL---------------------
23 Fugue 55.4418% -89 - C1 -3J6V - RT09_BOVIN I:[68-396] -----------------------------------------------------------------------------------SYTVDFIKKQIEEFNIGKRHLANMMGE-DPETFTQEDVDRAITYLFPSGLFEKRARPIMKH-PEEIFPKQRAVQWG---E-DGRPF---HFLFYTGKQSYYSLMHEA-YGKVLHAE-ERQDQLRAKG----LFSE--------KSKSKDLIGSR-WLIKEELEE---MLVEKL--------------------------------------------------SDQDYAQFIRLLERLSALPCDAAEEEFVGR-FRRTVTVQSKKHLI------EPLQYDEQGMAFSTGQGKRKTANAEAVVYGHG---------SGKIEINGVD---YLLYFPVTQDREQLM-FPFHF--L-D---RL---------GKHDVTCTVSG-------------GG--RSS----QAGAIRLA--MSRALCSFIT------EDEVEWMRQAGLLTTDP----RVRERKKPGQEGARRKFTWKKR----------------------------------------------------------------------------
9 HHSearch 54.4313%-101 - C2 -3O7Q FUCP_ECOLI A:[22-329] -------------------------RSYIIPFALLCSLFFLWAVANNLNDILL-------------------PQFQQA-----------------------------------FTLTN----FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITG---LFLYALG---AALFWPA----AE--IMN-YTLFLVGL-FIIAAGLGCL----ETAANPFVTVLGPESSGHFRLNL-AQTFNSFGA---IIAVVFGQSL-ILSNVPHQSQDVLDKMSPEQLSAYKHSLVLS--VQTPYMIIVAIVLLVALLI--MLTKFPALQSDN-H-SD-A-----------------------KQ-G---S----------F------------------SASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIP---GMTAGFAANYLTGTMVCFFIGRFTGTWLISRF---AP--HKV----LAAYALIA--MALCLISAFAGGHVGLIALTLCSAFMSIQYPTIF---SLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAA-GNIPTAELIPAL-CFAVIFIFARFRSQT------------------------------
14 HHSearch 54.2615%-110 - C2 -3WDO - ? A:[11-176] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATWGLGTVFSLRMLGMFMVLPVLTTYGMAL-Q---GASEALIGIAIGIYGLTQAVFQIPFGLLSDRI---GR--KPL----IVGGLAVF--AAGSVIAAL-S-D-SIWGIILGRALQGSGAI--A---AAVMALL-SDLT-REQNRTKAMAFIG------VSFGITF-AIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFS
3 PsiBlast_PDB 48.5020% -84 - C2 -1PV7 LACY_ECOLI A:[29-196] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFPIWLHDI-N---HISKSDTGIIFAAISLFSLLFQPLFGLLSDKL---GL--RKYLLWIITGMLVMF--APFFIFIFGPLLQYNI--------LVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMF----GCVGW-ALGASIVGIMFT-INNQFVFWL---GSGCALILAVLLFFAKTDAPSSATVANAVGANH
2 PsiBlast_PDB 48.1220% -77 - C2 -1PV6 - LACY_ECOLI A:[29-196] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFPIWLHDI-N---HISKSDTGIIFAAISLFSLLFQPLFGLLSDKL---GL--RKYLLWIITGMLVMF--APFFIFIFGPLLQYNI--------LVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMF----GCVGW-ALGASIVGIMFT-INNQFVFWL---GSGCALILAVLLFFAKTDAPSSATVANAVGANH
16 HHSearch 46.9719% -89 - C2 -2GFP - EMRD_ECOLI A:[26-171] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYIPAIADMA-RD-L---NVREGAVQSVMGAYLLTYGVSQLFYGPISDRV---GR--RPV----ILVGMSIF--MLATLVAVT-T-S-SLTVLIAASAMQGMGTGVGG---VMARTLP-RDLY-ERTQLRHANSLLN------MGILVSP-LLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSYKTL
5 PsiBlast_PDB 46.2820% -72 - C2 -2CFQ - LACY_ECOLI A:[29-196] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFPIWLHDI-N---HISKSDTGIIFAAISLFSLLFQPLFGLLSDKL---GL--RKYLLWIITGMLVMF--APFFIFIFGPLLQYNI--------LVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMF----GCVGW-ALGASIVGIMFT-INNQFVFWL---GSGCALILAVLLFFAKTDAPSSATVANAVGANH
4 PsiBlast_PDB 46.1920% -83 - C2 -2CFP - LACY_ECOLI A:[29-196] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFPIWLHDI-N---HISKSDTGIIFAAISLFSLLFQPLFGLLSDKL---GL--RKYLLWIITGMLVMF--APFFIFIFGPLLQYNI--------LVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMF----GCVGW-ALGASIVGIMFT-INNQFVFWL---GSGCALILAVLLFFAKTDAPSSATVANAVGANH
13 HHSearch 44.0319% -63 - C2 -3O7Q FUCP_ECOLI A:[38-177] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WAVANNLNDILLPQFQQ-A-F---TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL---SY--KAG----IITGLFLY--ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLE---TAANPFV-TVLG-PESSGHFRLNLAQ------TFNSFGA-IIAVVFGQSLIL-SNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVA
15 HHSearch 39.8314% -86 - C2 -2CFQ - LACY_ECOLI A:[259-393] --------------------------------------------------------------------------------------------------------------------------RVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLA---GTIMSVR---IIGSSF---------ATS-ALEVVILK-TLHMFEVPFL----LVGCFKYITSQFEVRFSATIYLVCFCFFKQLAM---IFMSVLAGNMYE---------------------------SIG--FQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 HHSearch 39.6911%-120 - C2 -3WDO - ? A:[41-188] -----------------------------------------------------------------------------------------------------------------QGASE----ALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGG---LAVFAAG---SVIAAL---------SDS-IWGIILGR-ALQGSGA--I----AAAVMALLSDLTREQNRTKAMAF-IGVSFGITF---AIAMVLGPIITH---------------------------KLG--LHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSF-SKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFP-AAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQF-W---QLVVGVQLFFVAFNLMEALLPSLISKESPAGY---KG--TAM----GVYSTSQF--LGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWL---AVASTMKEPPYVSSLRIEIPADIAANEALKVRLLETEGV-KEVLIAEEEHSA-YVKIDSKVTNRFEVEQAIRQAL-----------------------
17 HHSearch 38.1214% -81 - C2 -1PW4 - GLPT_ECOLI A:[289-430] --------------------------------------------------------------------------------------------------------------------------DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATG---VFFMTLVTIATIVYWMN----P---AGN-PTVDMICM-IVIGFLIYGP----VMLIGLHALELAPKKAAGTAAGF-TGLFGYLGGS--VAASAIVGYTVD---------------------------FFG--WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 38.0132% -88 - C2 -4PYP - GTR1_HUMAN A:[71-138] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFSVGGMIGSFSVGLFVNRF---GR--RNS----M--LMMNL--LAFVSAVLMGFSKLG--KSFEMLIL-GRFIIGVY---CGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIA-QVFGLDSIMGNK-DLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVL