@TOME V2.2
(Nov 2016)
Ref.
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : NTCP_HUMAN: (2015-12-08 )
MEAHNASAPFNFTLPPNFGKRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKRPQYMRYVIKGGMIIILLCSVAVTVLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVLSALFCLNGRCRRTVSMETGCQNVQLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLLLIAIFWCYEKFKTPKDKTKMIYTAATTEETIPGALGNGTYKGEDCSPCTA
Atome Classification :
(20 SA)
---------.........10........20........30.----------......--.40....----------------..---..50........---60........--------70...-..-------...80........90......----..100...----....---110.......120.......130......---------.140.......150..-------.....160---..-..-.-...-----------------------.170---------..----..-----------...180-----.......---.--190..---......200--------------.......----------------------------210.......220....-------...230....--------....240...---....250---------------------........260.......270-----.------......----------------------.280.......290..-----.....300.......310------------------------.........320.......330.......340----........--------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------MEAHNASA
P
F
N
F
TLPPNFGKR
P
T
D
L
A
L
S
V
I
L
V
----------
F
M
L
F
F
I
--
M
L
SLGC
T
----------------
M
E
---
F
S
K
I
K
A
H
LWKPK---
G
L
A
I
A
L
V
A
QY--------G
I
M
P
L
-
T
A
-------
F
V
L
G
K
V
F
R
LKN
I
E
A
L
A
I
L
V
C
G----CSPGG
N
L
S
----
N
V
F
S
---
L
A
MKGD
M
N
L
S
I
V
M
T
T
C
S
T
F
C
A
L
G
M
M
P
L
L
L
---------
Y
I
Y
SRGIYDGDLKDKV-------PY
K
G
I
V
-----
I
S
-
L
V
-
L
-
V
L
I
-----------------------PC
T
I
---------
G
I
----
V
L-----------KSK
R
P
------
Q
Y
M
R
Y
V
I---K--G
G
-
M
I
---
I
I
L
L
C
S
V
A
V
--------------
T
V
L
S
A
I
N
----------------------------V
G
K
S
I
M
F
A
M
T
P
L
L
I
A
T
S
-------
S
L
M
P
F
-
I
G
F
L
--------
L
G
Y
V
L
S
A
L
F
C---LNGRC
R
----------------------
R
T
V
SMETGC
Q
N
V
Q
L
C
S
T
I
L
N------V------AF
P
P
E
V
----------------------
I
G
P
L
F
F
F
P
L
L
Y
M
I
F
Q
L-----GE
G
L
L
L
I
A
I
F
W
C
Y
E
K
F--------------------------KTPKDK
T
K
M
I
Y
T
AATTEETIPGALGNGTYKG-----EDCSPCTA--------------
1
PsiBlast_PDB
84.45
27%
-135
- C17 -
4N7W
2
?
A:
[37-307]
----------------------------------------------------
L
L
M
L
I
--
M
F
A
M
G
V
T
----------------
L
R
---
L
D
D
F
K
R
V
L
S
R
P
A
---
P
V
A
A
A
T
F
L
H
Y
--------
L
I
M
P
L
-
T
A
-------
W
I
L
A
M
L
F
R
M
P
P
D
L
S
A
G
M
V
L
V
G
----
S
V
A
S
G
T
A
S
----
N
V
M
I
---
Y
L
A
K
G
D
V
A
L
S
V
T
I
S
A
V
S
T
L
V
G
V
F
A
T
P
L
L
T
---------
R
L
Y
V
------
D
A
T
I
S
V
-------
D
V
V
G
M
L
-----
K
S
-
I
L
Q
I
-
V
V
I
-----------------------
P
I
T
A
---------
G
L
----
V
I
-----------
H
H
T
F
T
------
K
T
V
K
R
I
E
---
P
--
Y
L
-
P
A
---
M
S
M
V
C
I
L
A
----------------
I
I
S
A
V
V
----------------------------
A
G
S
Q
S
H
I
A
S
V
G
F
V
V
I
I
A
-------
V
I
L
H
N
G
I
G
L
L
--------
S
G
Y
W
G
G
K
L
F
G
---
F
D
E
S
T
C
----------------------
R
T
L
A
I
E
V
G
M
Q
N
S
G
L
A
A
T
L
G
K
------
I
------
Y
F
S
P
L
A
----------------------
A
L
P
G
A
L
F
S
V
W
H
N
L
---------
S
G
S
L
L
-
A
G
Y
W
S
G
K
P
V
--------------------------
K
K
D
Q
E
-----------------------------------------------------
2
PsiBlast_PDB
82.28
27%
-144
* C17 *
4N7X
-
?
A:
[42-306]
----------------------------------------------------
L
L
M
L
I
--
M
F
A
M
G
V
T
----------------
L
R
---
L
D
D
F
K
R
V
L
S
R
P
A
---
P
V
A
A
A
T
F
L
H
Y
--------
L
I
M
P
L
-
T
A
-------
W
I
L
A
M
L
F
R
M
P
P
D
L
S
A
G
M
V
L
V
G
----
S
V
A
S
G
T
A
S
----
N
V
M
I
---
Y
L
A
K
G
D
V
A
L
S
V
T
I
S
A
V
S
T
L
V
G
V
F
A
T
P
L
L
T
---------
R
L
Y
V
------
D
A
T
I
S
V
-------
D
V
V
G
M
L
-----
K
S
I
L
Q
-
I
-
V
V
I
-----------------------
P
I
T
A
---------
G
L
----
V
I
-----------
H
H
T
F
T
------
K
T
V
K
R
I
E
---
P
--
Y
L
-
P
A
---
M
S
M
V
C
I
L
A
----------------
I
I
S
A
V
V
----------------------------
A
G
S
Q
S
H
I
A
S
V
G
F
V
V
I
I
A
-------
V
I
L
H
N
G
I
G
L
L
--------
S
G
Y
W
G
G
K
L
F
G
---
F
D
E
S
T
C
----------------------
R
T
L
A
I
A
V
G
M
Q
N
S
G
L
A
A
T
L
G
K
------
I
------
Y
F
S
P
L
A
----------------------
A
L
P
G
A
L
F
S
V
W
H
N
L
---------
S
G
S
L
L
-
A
G
Y
W
S
G
K
P
-------------------------------------------------------------------------------------
26
Fugue
82.22
22%
-139
- C17 -
3ZUY
8
?
A:
[2-309]
-N
I
L
S
K
I
S
S
F
I
G
K
T
F
S
L
W
A
A
L
F
A
A
A
A
F
F
A
P
D
T
F
K
W
A
G
P
Y
I
P
----------
W
L
L
G
I
I
--
M
F
G
M
G
L
T
----------------
L
K
---
P
S
D
F
D
I
L
F
K
H
P
K
---
V
V
I
I
G
V
I
A
Q
F
--------
A
I
M
P
A
-
T
A
-------
W
L
L
S
K
L
L
N
L
P
A
E
I
A
V
G
V
I
L
V
G
----
C
C
P
G
G
T
A
S
----
N
V
M
T
---
Y
L
A
R
G
N
V
A
L
S
V
A
V
T
S
V
S
T
L
I
S
P
L
L
T
P
A
I
F
---------
L
M
L
A
------
G
E
M
L
E
I
-------
Q
A
A
G
M
L
-----
M
S
-
I
V
-
K
M
V
L
L
-----------------------
P
I
V
L
---------
G
L
----
I
V
-----------
H
K
V
L
G
------
S
K
T
E
K
L
T
---
D
--
A
--
L
P
---
L
V
S
V
A
A
I
V
L
--------------
I
I
G
A
V
V
G
----------------------------
A
S
K
G
K
I
M
E
S
G
L
L
I
F
A
V
V
-------
V
L
H
N
G
-
I
G
Y
L
--------
L
G
F
F
A
A
K
W
T
G
---
L
P
Y
D
A
Q
----------------------
K
T
L
T
I
E
V
G
M
Q
N
S
G
L
A
A
A
L
A
A
------
A
------
H
F
A
A
A
-------------------------
P
V
V
A
V
P
G
A
L
F
S
V
W
H
-----
N
I
S
G
S
L
L
A
T
Y
W
A
A
K
A
-------------------------------------------------------------------------------------
35
Fugue
68.70
19%
-133
- C15 -
4WGV
-
?
A:
[5-399]
VGYMD
P
G
N
W
I
T
S
M
Q
G
G
A
Q
Y
G
Y
T
L
-------
L
F
V
I
L
I
S
S
L
A
A
----------
M
L
L
Q
S
M
--
T
V
R
L
G
I
A
----------------
T
G
KD
L
A
Q
M
T
R
H
F
L
S
K
P
V
---
A
I
I
F
W
I
I
A
E
L
--------
A
I
I
A
T
D
I
A
-------
E
V
I
G
S
A
I
A
L
D
L
I
F
G
I
P
-
L
I
V
G
----
A
L
I
T
V
F
D
V
----
F
L
L
L
---
F
I
M
R
F
G
F
R
K
I
E
A
I
V
G
T
L
I
F
T
V
L
A
I
F
V
F
E
V
---------
F
I
S
S
P
Q
L
T
D
-
I
L
N
G
F
V
-------
P
H
K
E
I
V
TN
Q
G
I
L
Y
-
I
A
-
L
-
G
I
I
-----------------------
G
A
T
I
M
P
H
N
L
Y
L
H
S
S
I
----
V
Q
S
R
K
Y
D
R
HDNEE
K
A
Q
A
I
------
K
Y
A
T
I
D
S
---
N
--
L
Q
-
L
S
---
I
A
F
V
V
N
C
L
L
--------------
L
T
L
G
A
A
L
FFGTKTNDLGG
F
Y
D
L
Y
H
A
L
K
T
EPVLGA
T
L
G
G
V
M
S
T
L
F
A
V
A
L
L
A
S
G
-------
Q
N
S
T
I
-
T
G
T
L
--------
A
G
Q
I
V
M
E
G
F
L
R
L
S
I
P
N
W
L
R
----------------------
R
L
I
T
R
S
L
A
V
I
P
V
I
I
C
L
I
I
F
K
--------------
G
N
S
E
K
----------------------
I
E
Q
L
L
V
F
S
Q
V
F
L
S
I
A
L
-----
P
F
S
L
I
P
L
Q
L
A
T
S
N
K
K
L
--------------------------
M
G
P
F
I
N
K
T
W
V
N
I
I
S
W
T
L
I
V
I
L
S
G
L
N
V
Y
-------------------------------
3
PsiBlast_PDB
66.62
26%
-122
- C17 -
3ZUY
7
?
A:
[42-265]
---------------------------------------------------
W
L
L
G
I
I
--
M
F
G
M
G
L
T
----------------
L
K
---
P
S
D
F
D
I
L
F
K
H
P
K
---
V
V
I
I
G
V
I
A
Q
F
--------
A
I
M
P
A
-
T
A
-------
W
L
L
S
K
L
L
N
L
P
A
E
I
A
V
G
V
I
L
V
G
----
C
C
P
G
G
T
A
S
----
N
V
M
T
---
Y
L
A
R
G
N
V
A
L
S
V
A
V
T
S
V
S
T
L
I
S
P
L
L
T
P
A
I
F
---------
L
M
L
A
-----
G
E
M
L
E
-
I
-------
Q
A
A
G
M
L
-----
M
S
-
I
V
K
M
-
V
L
L
-----------------------
P
I
V
L
---------
G
L
I
V
H
K
V
L
-----------
G
S
K
T
E
------
K
-----
L
---
T
--
D
A
-
L
P
---
L
V
S
V
A
A
I
V
L
--------------
I
I
G
A
V
V
G
----------------------------
A
S
K
G
K
I
M
E
S
G
L
L
I
F
A
V
V
-------
V
L
H
N
G
-
I
G
Y
L
--------
L
G
F
F
A
A
K
W
T
G
---
L
P
Y
D
A
Q
----------------------
K
T
L
T
I
E
V
G
M
Q
N
S
G
L
A
A
A
L
A
A
------
A
------
H
F
A
A
A
P
----------------------
V
V
A
V
P
G
A
L
F
S
V
W
H
N
I
S
-----
G
S
L
L
A
T
Y
W
A
A
K
A
----------------------------------------------------------------------------------------
4
PsiBlast_PDB
64.39
25%
-126
- C17 -
3ZUX
7
?
A:
[47-270]
---------------------------------------------------
W
L
L
G
I
I
--
M
F
G
M
G
L
T
----------------
L
K
---
P
S
D
F
D
I
L
F
K
H
P
K
---
V
V
I
I
G
V
I
A
Q
F
--------
A
I
M
P
A
-
T
A
-------
W
C
L
S
K
L
L
N
L
P
A
E
I
A
V
G
V
I
L
V
G
----
C
C
P
G
G
T
A
S
----
N
V
M
T
---
Y
L
A
R
G
N
V
A
L
S
V
A
V
T
S
V
S
T
L
T
S
P
L
L
T
P
A
I
F
---------
L
M
L
A
-----
G
E
M
L
E
-
I
-------
Q
A
A
G
M
L
-----
M
S
-
I
V
K
M
-
V
L
L
-----------------------
P
I
V
L
---------
G
L
I
V
H
K
V
L
-----------
G
S
K
T
E
------
K
-----
L
---
T
--
D
A
-
L
P
---
L
V
S
V
A
A
I
V
L
--------------
I
I
G
A
V
V
G
----------------------------
A
S
K
G
K
I
M
E
S
G
L
L
I
F
A
V
V
-------
V
L
H
N
G
-
I
G
Y
L
--------
L
G
F
F
A
A
K
W
T
G
---
L
P
Y
D
A
Q
----------------------
K
A
L
T
I
E
V
G
M
Q
N
S
G
L
A
A
A
L
A
A
------
A
------
H
F
A
A
A
P
----------------------
V
V
A
V
P
G
A
L
F
S
V
W
H
N
I
S
-----
G
S
L
L
A
T
Y
W
A
A
K
A
----------------------------------------------------------------------------------------
31
Fugue
63.34
17%
-121
- C14 -
4P4M
3
?
A:
[92-378]
-----------
K
P
K
L
K
A
I
Q
E
L
T
Q
V
H
G
F
G
P
R
A
A
A
A
L
F
D
R
E
G
I
----------
F
T
V
D
E
L
--
L
Q
K
A
D
S
I
----------------
P
S
---
L
T
D
Q
Q
R
V
G
I
K
Y
F
---
Y
D
I
N
E
K
I
P
M
Q
--------
E
S
V
L
H
-
E
N
-------
Y
L
R
E
K
C
M
E
V
L
G
-
K
D
F
S
I
L
I
C
G
----
S
Y
R
R
R
H
P
-------
F
S
-------
G
D
---------------------
V
D
---------
A
I
L
S
R
T
L
D
A
P
P
L
S
E
P
V
-------
A
A
T
G
V
L
-----
G
H
-
F
V
-
E
-
F
L
E
-----------------------
S
-----------------------------------
L
------
K
Y
L
E
A
T
M
---
A
--
Q
G
P
L
K
---
Y
M
G
M
G
R
L
P
P
--------------
R
I
N
T
K
V
Y
----------------------------
K
A
R
R
V
D
I
R
L
I
E
T
K
S
V
P
T
-------
A
M
L
T
F
-
T
G
------------------------------------------------------------------
S
K
N
F
N
------
V
------
I
M
R
Q
A
A
----------------------
I
S
K
G
Y
L
L
N
E
-
Y
G
L
F
K
L
-----
G
T
P
E
E
A
R
G
K
-
N
A
G
E
E
L
--------------------------
G
V
P
K
D
E
L
E
D
K
R
V
E
V
R
S
E
Q
D
V
F
D
V
L
G
M
P
Y
A
K
P
-----
E
N
R
D
P
-----------------
30
Fugue
61.93
15%
-134
- C13 -
2XTS
8
?
A:
[2-390]
--GTPD
P
L
I
T
E
I
Q
P
W
A
S
E
F
G
E
A
V
D
A
H
P
Y
G
L
P
I
H
F
E
S
H
V
K
R
Q
----------
Y
V
E
W
L
T
--
E
S
P
V
S
S
I
N
F
T
PIHALEGTITPQG
C
A
---
F
E
R
H
H
S
G
A
I
E
L
S
---
K
Q
D
Y
R
L
M
I
N
G
--------
L
V
E
K
P
-
L
V
-------
F
T
F
E
D
L
L
R
F
P
R
T
T
T
T
A
F
C
E
C
A
--------
A
N
G
G
----
M
E
W
G
---
G
A
Q
L
E
G
C
Q
Y
T
Q
G
M
I
H
N
M
E
Y
V
G
V
P
L
S
V
L
L
A
E
A
GVKPEGK
W
L
Y
A
E
G
A
D
A
S
S
N
G
R
S
F
-------
P
M
E
K
V
M
-----
D
D
-
V
M
-
L
-
A
F
F
-----------------------
A
N
-----------
G
E
----
A
L
-----------
R
K
E
H
G
------
Y
P
A
R
L
V
V
P
GW
E
--
G
N
-
M
W
---
V
K
W
V
R
R
L
G
I
Y
DKAVESREETSKY
T
D
L
M
P
D
G
----------------------------
R
A
R
K
W
T
W
V
M
D
A
K
S
V
I
T
S
PSPQVPI
R
H
G
K
G
-
P
L
V
I
--------
S
G
L
A
W
S
G
-------
N
G
R
I
T
----------------------
R
V
D
V
S
L
D
G
G
K
N
W
T
T
A
R
I
T
-----------------
G
Q
A
L
----------------------
P
K
A
L
T
R
F
H
L
D
I
D
W
--
D
-----
G
S
E
M
L
L
Q
S
R
A
V
D
E
T
G
Y
--------------------------
V
Q
P
---
T
K
D
A
L
R
A
I
R
G
R
N
N
V
Y
H
N
N
G
I
Q
T
W
W
V
-----
K
A
D
G
E
V
E
N
VEIA----------
32
Fugue
53.87
17%
-125
- C10 -
5BP8
1
?
A:
[6-520]
--------A
P
R
E
A
E
A
A
A
L
L
A
A
T
V
A
D
P
W
G
L
V
A
P
S
V
Y
D
T
A
R
L
V
----------
S
L
A
P
W
L
DG
H
R
E
R
L
G
Y
----------------
L
A
---
K
E
Q
N
Q
D
G
S
W
G
A
P
DGY
G
L
V
P
T
L
S
A
V
E
--------
A
L
L
T
E
-
L
A
R
TDSGAP
H
L
S
P
D
D
L
A
A
A
C
A
D
G
L
G
A
L
R
D
G
----
L
L
A
G
P
V
P
D
TIG
V
E
F
V
A
---
P
S
L
L
A
D
I
N
T
R
L
A
A
L
T
E
Q
A
P
G
K
L
G
A
W
S
G
T
T
---------
L
T
S
P
A
P
D
L
D
G
A
L
L
A
G
V
R
E
M
T
E
Q
A
P
L
P
E
K
L
-----
W
H
-
T
L
-
E
-
A
V
T
RDGTRGARPHEGAPPHNGSVGCS
P
A
A
T
---------
A
A
----
W
L
-----------
G
A
A
P
D
PAA
P
G
V
A
Y
L
R
D
V
Q
---
A
R
F
G
G
-
P
V
PSI
T
P
I
V
Y
F
E
Q
A
--------------
W
V
L
N
S
L
A
----------------------------
A
S
G
L
R
Y
E
A
P
A
A
L
L
D
S
L
E
-------
A
G
L
T
D
-
E
G
I
A
AAPGLPSD
S
D
D
T
A
A
V
L
F
A
---
L
A
Q
H
G
R
THRP
D
S
L
M
H
F
RRDGYFSCFGVE
R
T
P
S
T
S
T
N
A
H
I
L
E
A
L
G
H
H
V
T
------
V
R
PDDAG
R
Y
G
A
E
I
R
M
I
S
D
W
L
L
D
N
QLPDG
S
W
M
D
KWH
A
S
P
Y
Y
A
T
A
C
C
A
L
A
L
A
E
FGGPS
A
R
A
A
V
D
R
A
A
A
W
A
L
A
T
Q
RADGSWGRWQGT
T
E
E
T
A
Y
M
V
Q
L
L
M
R
T
R
T
P
G
S
P
G
T
V
A
R
S
A
A
R
G
C
D
A
L
L
A
H
D
D
P
A
S
Y
P
G
L
W
H
D
K
D
I
Y
A
P
V
T
V
I
R
A
A
R
L
A
A
L
A
L
G
GA
34
Fugue
50.17
13%
-112
- C16 -
3TNF
4
?
B:
[3-381]
------L
D
E
Y
E
Q
A
I
K
R
A
Q
E
N
I
K
K
G
E
E
L
E
K
K
L
D
K
L
E
R
Q
G
K
D
L
E
D
K
Y
K
T
Y
E
E
N
L
E
G
F
E
K
--
L
L
T
D
S
E
E
----------------
L
S
---
L
S
E
I
N
E
K
M
E
A
F
S
---
K
D
S
E
K
L
T
Q
L
M
E
K
H
KGD
E
K
T
V
Q
S
L
-
Q
R
-------
E
H
H
D
I
K
A
K
L
A
N
L
Q
V
L
H
D
A
H
T
G
K
K
S
Y
V
N
E
K
G
N
P
V
----
S
S
L
K
DAH
L
A
I
N
K
D
---
Q
E
V
V
E
H
E
G
Q
F
Y
L
L
Q
K
G
Q
W
D
A
---------
I
K
N
N
P
A
A
L
E
K
A
Q
K
D
Y
S
-------
Q
S
K
H
D
L
-----
A
T
-
I
K
-
M
-
E
A
L
-----------------------
I
H
K
L
---------
S
L
----
E
M
-----------
E
K
Q
L
E
------
T
I
N
N
L
I
M
---
S
--
T
D
-
P
K
---
E
N
E
E
A
T
K
L
L
--------------
H
K
H
N
G
L
N
----------------------------
L
K
L
A
N
L
Q
D
M
L
A
V
H
R
K
E
K
-------
S
F
F
N
E
-
K
G
E
E
--------
V
T
S
L
N
D
A
H
Y
V
---
I
-
G
K
D
Q
----------------------
Q
L
F
N
L
G
G
K
F
Y
P
I
H
K
E
Q
K
I
L
E
K
DG
K
F
Y
L
------
L
K
Q
G
E
D
----------------------
W
E
S
I
K
D
S
P
E
K
Q
K
K
A
E
H
-----
D
F
H
K
L
Q
Y
E
T
P
M
T
V
K
K
L
--------------------------
V
H
H
N
K
G
L
E
T
T
I
H
K
E
R
V
E
E
T
K
Q
Q
L
E
D
N
G
K
E
K
I
-----
E
I
A
N
N
I
S
K
--------------
18
HHSearch
42.37
33%
134
- C8 -
3LCZ
-
?
A:
[7-30]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
E
T
T
C
P
N
C
N
G
S
G
R
E
E
P
-----
E
P
C
P
K
C
L
G
--------------
28
Fugue
37.69
45%
155
- C11 -
1JLP
-
CM3F_CONPU
A:
[1-24]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
C
C
---
L
Y
G
S
C
R
----------------------
F
------
G
C
Y
N
A
L
C
C
R
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
37.56
45%
1264
- C4 -
3GE2
1
?
A:
[48-58]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
D
I
D
G
T
Y
T
G
-----
Q
D
--------------------
22
HHSearch
37.07
35%
338
- C7 -
2J5H
-
A:
[5-21]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
I
L
H
G
T
W
L
P
-----
K
K
C
S
L
C
R
C
--------------
19
HHSearch
33.88
42%
995
- C1 -
1PQR
-
CA4A_CONER
A:
[4-15]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
P
Y
-
N
-----
A
A
C
H
-
C
G
C
--------------
27
Fugue
32.34
42%
211
- C9 -
1AS5
-
A:
[1-24]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
C
C
---
L
Y
G
K
C
R
----------------------
R
Y
-----
G
C
S
S
A
S
C
C
Q
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
31.82
42%
89
- C12 -
1JLO
-
A:
[1-24]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
C
C
---
L
Y
G
K
C
R
----------------------
R
Y
-----
G
C
S
S
A
S
C
C
Q
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
31.60
42%
665
- C6 -
1P1P
-
CA4A_CONPU
A:
[4-15]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
Y
P
N
-----
A
A
C
H
P
C
S
C
--------------
11
PsiBlast_PDB
31.46
42%
173
- C18 -
2H64
-
BMR1A_HUMAN
B:
[96-123]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
----------------------
R
T
I
E
----
C
C
R
T
N
L
C
N
Q
Y
L
Q
------
P
------
T
L
P
P
V
V
----------------------
I
G
P
F
---------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
30.46
39%
140
- C18 -
2QJ9
-
BMR1A_HUMAN
D:
[96-124]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
----------------------
R
S
I
E
----
C
C
R
T
N
L
C
N
Q
Y
L
Q
------
P
------
T
L
P
P
V
V
----------------------
I
G
P
F
F
--------------------------------------------------------------------------------------------------------------------