@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ADT1_HUMAN: (2015-12-07 )
MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CDL_A_4(2C3E)
ADT1_BOVIN
[Raw transfer]




CDL_A_4(1OKC)
ADT1_BOVIN
[Raw transfer]




CDL_A_4(1OKC)
ADT1_BOVIN
[Raw transfer]




CM5_A_7(4C9H)
ADT2_YEAST
[Raw transfer]




CDL_A_5(1OKC)
ADT1_BOVIN
[Raw transfer]




21 Fugue 96.7596% -86 - C5 -1OKC 5.3 ADT1_BOVIN
11 HHSearch 96.7596% -86 - C5 -1OKC 6.6 ADT1_BOVIN
1 PsiBlast_PDB 96.7596% -86 - C5 -1OKC 6.6 ADT1_BOVIN
2 PsiBlast_PDB 94.5496% -86 - C5 -2C3E 6.4 ADT1_BOVIN
10 PsiBlast_CBE 83.8152% -75 - C5 -4C9J - ADT3_YEAST -
9 PsiBlast_CBE 81.8352% -73 - C5 -4C9Q - ADT3_YEAST -
3 PsiBlast_PDB 81.4953% -70 - C5 -4C9H - ADT2_YEAST -
8 PsiBlast_CBE 79.9653% -67 - C5 -4C9H 3.1 ADT2_YEAST
4 PsiBlast_PDB 77.3252% -73 - C5 -4C9J - ADT3_YEAST -
5 PsiBlast_PDB 77.1752% -75 - C5 -4C9Q - ADT3_YEAST -
22 Fugue 63.7922% -92 - C3 -4J1Q - -
24 Fugue 57.1614% -72 * C3 *1WKV - CYSO_AERPE -
14 HHSearch 56.4623% -51 - C5 -1OKC - ADT1_BOVIN -
28 Fugue 52.5320% -79 * C4 *1CJD - CAPSD_BPPRD -
25 Fugue 52.1418% -63 - C3 -1ZY7 - RED1_HUMAN -
6 PsiBlast_PDB 51.3225% -55 - C5 -2LCK - UCP2_MOUSE -
12 HHSearch 47.4924% -54 - C5 -2LCK - UCP2_MOUSE -
29 Fugue 45.2616% -88 - C2 -4KS9 - ? -
26 Fugue 42.4913% -62 * C2 *1YNH - ASTB_ECOLI -
15 HHSearch 42.239% -45 * C5 *3F2E - ? -