@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EAA4_HUMAN: (2015-12-07 )
MSSHGNSLFLRESGQRLGRVGWLQRLQESLQQRALRTRLRLQTMTLEHVLRFLRRNAFILLTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLDNKATGRMGMRAAVYYMVTTIIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMDLIRNMFPPNLVEACFKQFKTQYSTRVVTRTMVRTENGSEPGASMPPPFSVENGTSFLENVTRALGTLQEMLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLNEAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGIVLPLIYFLVTHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGATVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLGKPYKSLMAQEKGASRGRGGNESAM

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TB1_F_6(2NWW)
?
[Raw transfer]



TB1_E_5(2NWW)
?
[Raw transfer]



ASP_C_6(3KBC)
?
[Raw transfer]



ASP_A_4(3KBC)
?
[Raw transfer]



ASP_B_5(3KBC)
?
[Raw transfer]



TB1_D_4(2NWW)
?
[Raw transfer]



ASP_B_8(3V8F)
?
[Raw transfer]



ASP_A_4(3V8F)
?
[Raw transfer]



ASP_C_12(3V8F)
?
[Raw transfer]



ASP_C_14(4IZM)
?
[Raw transfer]



ASP_A_6(4IZM)
?
[Raw transfer]



ASP_B_10(4IZM)
?
[Raw transfer]



ASP_A_4(4X2S)
?
[Raw transfer]



ASP_B_7(4X2S)
?
[Raw transfer]



ASP_C_10(4X2S)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]
69 Fugue 92.9234%-127 - C3 -4OYF - ? -
58 HHSearch 92.8834%-139 - C3 -2NWL 4.7 ?
68 Fugue 88.9633%-126 - C3 -1XFH - ? -
38 PsiBlast_CBE 75.4837%-115 - C3 -2NWL 4.5 ?
10 PsiBlast_PDB 75.4137%-115 - C3 -2NWL 4.7 ?
15 PsiBlast_PDB 75.2937%-118 - C3 -4OYF - ? -
13 PsiBlast_PDB 75.2737%-117 - C3 -2NWW 3.1 ?
50 PsiBlast_CBE 74.9237%-112 - C3 -2NWX 4.5 ?
14 PsiBlast_PDB 74.8437%-112 - C3 -2NWX 4.1 ?
2 PsiBlast_PDB 74.7337%-106 - C3 -4KY0 - ? -
49 PsiBlast_CBE 74.4837%-112 - C3 -2NWX 4.6 ?
51 PsiBlast_CBE 74.4737%-116 - C3 -2NWW 4.8 ?
21 PsiBlast_CBE 74.1837%-105 - C3 -4KY0 - ? -
52 PsiBlast_CBE 74.1037%-117 - C3 -2NWW 3.4 ?
34 PsiBlast_CBE 73.8937%-118 - C3 -3V8F 3.3 ?
3 PsiBlast_PDB 73.8237%-110 - C3 -3KBC 4.1 ?
37 PsiBlast_CBE 73.6737%-116 - C3 -2NWL 4.4 ?
24 PsiBlast_CBE 73.6237%-111 - C3 -3KBC 4.1 ?
23 PsiBlast_CBE 73.5237%-111 - C3 -3KBC 4.1 ?
17 PsiBlast_PDB 73.5036%-117 - C3 -4OYE - ? -
8 PsiBlast_PDB 73.1837%-118 - C3 -3V8F 3.4 ?
33 PsiBlast_CBE 73.0537%-118 - C3 -3V8F 3.3 ?
1 PsiBlast_PDB 72.9938%-121 - C3 -4X2S 3.7 ?
9 PsiBlast_PDB 72.4037%-113 - C3 -4IZM 3.9 ?
35 PsiBlast_CBE 72.3337%-118 - C3 -4IZM 3.8 ?
36 PsiBlast_CBE 71.3637%-110 - C3 -4IZM 5.0 ?
20 PsiBlast_CBE 70.7038%-120 - C3 -4X2S 3.5 ?
19 PsiBlast_CBE 70.6938%-120 - C3 -4X2S 3.3 ?