@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SC6A2_HUMAN: (2015-12-11 )
MLLARMNPQVQPENNGADTGPEQPLRARKTAELLVVKERNGVQCLLAPRDGDAQPRETWGKKIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFSSFTLNLPWTDCGHTWNSPNCTDPKLLNGSVLGNHTKYSKYKFTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCLMVVVIVLYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEATVWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSSINCITSFVSGFAIFSILGYMAHEHKVNIEDVATEGAGLVFILYPEAISTLSGSTFWAVVFFVMLLALGLDSSMGGMEAVITGLADDFQVLKRHRKLFTFGVTFSTFLLALFCITKGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSNDIQQMMGFRPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYIFPPWANWVGWGIALSSMVLVPIYVIYKFLSTQGSLWERLAYGITPENEHHLVAQRDIRQFQLQHWLAI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

41U_A_8(4XNU)
?
[Raw transfer]



21B_A_7(4M48)
?
[Raw transfer]



LDP_A_11(4XP1)
?
[Raw transfer]



B40_A_4(4XP6)
?
[Raw transfer]



42F_A_5(4XP5)
?
[Raw transfer]



N9S_A_10(4XPT)
?
[Raw transfer]



NAG_C_5(4XP9)
?
[Raw transfer]



N9S_A_11(4XPH)
?
[Raw transfer]



NAG_A_9(4XP1)
?
[Raw transfer]



NAG_A_9(4XP6)
?
[Raw transfer]
7 PsiBlast_PDB 92.0359%-156 - C5 -4XPT 2.9 ?
4 PsiBlast_PDB 91.8258%-155 - C5 -4XPA - ? -
12 PsiBlast_PDB 91.5758%-157 - C5 -4XP6 4.3 ?
5 PsiBlast_PDB 91.5258%-155 - C5 -4XP9 1.8 ?
9 PsiBlast_PDB 91.5058%-153 - C5 -4XNX - ? -
6 PsiBlast_PDB 91.4659%-157 - C5 -4XPH 2.8 ?
11 PsiBlast_PDB 91.4158%-155 - C5 -4XP5 6.6 ?
14 PsiBlast_PDB 91.3058%-154 - C5 -4XNU 5.6 ?
8 PsiBlast_PDB 91.1258%-154 - C5 -4XPG - ? -
1 PsiBlast_PDB 91.1158%-155 - C5 -4XPB - ? -
10 PsiBlast_PDB 90.9758%-155 - C5 -4XP1 4.1 ?
3 PsiBlast_PDB 90.8558%-155 - C5 -4XP4 - ? -
13 PsiBlast_PDB 90.7857%-153 - C5 -4M48 6.6 ?
2 PsiBlast_PDB 90.5758%-152 - C5 -4XPF - ? -
19 PsiBlast_PDB 69.5330%-139 - C5 -4MMB - ? -
15 PsiBlast_PDB 69.4830%-140 - C5 -4MM6 - ? -
20 PsiBlast_PDB 69.0830%-141 - C5 -4MMC - ? -
18 PsiBlast_PDB 69.0730%-141 - C5 -4MMA - ? -
16 PsiBlast_PDB 68.3230%-142 - C5 -4MM7 - ? -
17 PsiBlast_PDB 67.7330%-143 - C5 -4MM8 - ? -