@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SC6A3_HUMAN: (2015-12-11 )
MSKSKCSVGLMSSVVAPAKEPNAVGPKEVELILVKEQNGVQLTSSTLTNPRQSPVEAQDRETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPILKGVGFTVILISLYVGFFYNVIIAWALHYLFSSFTTELPWIHCNNSWNSPNCSDAHPGDSSGDSSGLNDTFGTTPAAEYFERGVLHLHQSHGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAIDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIVTTSINSLTSFSSGFVVFSFLGYMAQKHSVPIGDVAKDGPGLIFIIYPEAIATLPLSSAWAVVFFIMLLTLGIDSAMGGMESVITGLIDEFQLLHRHRELFTLFIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVGQFSDDIQQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVTFRPPHYGAYIFPDWANALGWVIATSSMAMVPIYAAYKFCSLPGSFREKLAYAIAPEKDRELVDRGEVRQFTLRHWLKV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LDP_A_11(4XP1)
?
[Raw transfer]



B40_A_4(4XP6)
?
[Raw transfer]



N9S_A_6(4XPB)
?
[Raw transfer]



N9S_A_10(4XPT)
?
[Raw transfer]



N9S_A_4(4XNX)
?
[Raw transfer]



41U_A_8(4XNU)
?
[Raw transfer]



N9S_A_10(4XPA)
?
[Raw transfer]



NAG_C_5(4XP9)
?
[Raw transfer]



N9S_A_11(4XPH)
?
[Raw transfer]



NAG_A_9(4XP1)
?
[Raw transfer]



NAG_A_9(4XP6)
?
[Raw transfer]



42F_A_5(4XP5)
?
[Raw transfer]
14 PsiBlast_PDB 96.5954%-152 - C6 -4XNU 5.3 ?
8 PsiBlast_PDB 96.5755%-153 - C6 -4XPH 2.7 ?
4 PsiBlast_PDB 96.5755%-153 - C6 -4XPT 2.9 ?
1 PsiBlast_PDB 96.4655%-154 - C6 -4XPB 2.3 ?
7 PsiBlast_PDB 96.4254%-151 - C6 -4M48 - ? -
9 PsiBlast_PDB 96.1954%-150 - C6 -4XP9 2.7 ?
3 PsiBlast_PDB 96.1655%-152 - C6 -4XPG - ? -
10 PsiBlast_PDB 96.0554%-150 - C6 -4XNX 3.0 ?
13 PsiBlast_PDB 95.8954%-154 - C6 -4XP6 4.3 ?
6 PsiBlast_PDB 95.7754%-152 - C6 -4XPA 2.9 ?
11 PsiBlast_PDB 95.7254%-152 - C6 -4XP1 4.1 ?
12 PsiBlast_PDB 95.5954%-154 - C6 -4XP5 6.6 ?
2 PsiBlast_PDB 95.4055%-150 - C6 -4XPF - ? -
5 PsiBlast_PDB 95.0154%-152 - C6 -4XP4 - ? -
18 PsiBlast_PDB 69.9626%-135 - C6 -4MM7 - ? -
20 PsiBlast_PDB 69.8926%-135 - C6 -4MM9 - ? -
32 Fugue 69.8826%-139 - C6 -4US3 - ? -
16 PsiBlast_PDB 69.8226%-136 - C6 -4MM5 - ? -
19 PsiBlast_PDB 69.6426%-136 - C6 -4MM8 - ? -
17 PsiBlast_PDB 69.5026%-135 - C6 -4MM6 - ? -