@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SC6A4_HUMAN: (2015-12-11 )
METTPLNSQKQLSACEDGEDCQENGVLQKVVPTPGDKVESGQISNGYSAVPSPGAGDDTRHSIPATTTTLVAELHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSPPQLRLFQYNYPYWSIILGYCIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPETPTEIPCGDIRLNAV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

41U_A_8(4XNU)
?
[Raw transfer]



41X_A_10(4XNX)
?
[Raw transfer]



COC_A_9(4XP4)
?
[Raw transfer]



COC_A_5(4XPB)
?
[Raw transfer]



21B_A_7(4M48)
?
[Raw transfer]



42L_A_4(4XPG)
?
[Raw transfer]



42F_A_6(4XPF)
?
[Raw transfer]



42F_A_5(4XP5)
?
[Raw transfer]



B40_A_4(4XP6)
?
[Raw transfer]



1WE_C_9(4XP9)
?
[Raw transfer]



42J_A_6(4XPA)
?
[Raw transfer]



LDP_A_11(4XP1)
?
[Raw transfer]



42J_A_5(4XPT)
?
[Raw transfer]



42J_A_5(4XPH)
?
[Raw transfer]
9 PsiBlast_PDB 99.6953%-154 - C6 -4XP9 3.4 ?
11 PsiBlast_PDB 99.6753%-156 - C6 -4XP1 4.3 ?
13 PsiBlast_PDB 99.1853%-156 - C6 -4XP5 6.7 ?
8 PsiBlast_PDB 99.1253%-156 - C6 -4XNU 6.2 ?
12 PsiBlast_PDB 98.9853%-154 - C6 -4XNX 7.7 ?
7 PsiBlast_PDB 98.9053%-154 - C6 -4XPA 4.5 ?
2 PsiBlast_PDB 98.7753%-155 - C6 -4XPF 4.6 ?
5 PsiBlast_PDB 98.7553%-156 - C6 -4XPT 5.2 ?
14 PsiBlast_PDB 98.6453%-153 - C6 -4XP6 4.3 ?
10 PsiBlast_PDB 98.6253%-156 - C6 -4M48 7.2 ?
3 PsiBlast_PDB 98.6053%-157 - C6 -4XPG 5.9 ?
1 PsiBlast_PDB 98.5053%-159 - C6 -4XPB 6.3 ?
6 PsiBlast_PDB 98.4853%-154 - C6 -4XP4 6.9 ?
4 PsiBlast_PDB 98.0653%-153 - C6 -4XPH 5.6 ?
31 Fugue 72.5222%-139 * C6 *2A65 - ? -
18 PsiBlast_PDB 72.2528%-137 - C6 -4MM7 - ? -
16 PsiBlast_PDB 72.0728%-137 - C6 -4MM5 - ? -
17 PsiBlast_PDB 71.9528%-137 - C6 -4MM6 - ? -
21 HHSearch 71.8924%-144 - C6 -2A65 - ? -
20 PsiBlast_PDB 71.7728%-136 - C6 -4MM9 - ? -