@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SC6A7_HUMAN: (2015-12-11 )
MKKLQGAHLRKPVTPDLLMTPSDQGDVDLDVDFAAHRGNWTGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFLMLAICGIPLFFLELSLGQFSSLGPLAVWKISPLFKGAGAAMLLIVGLVAIYYNMIIAYVLFYLFASLTSDLPWEHCGNWWNTELCLEHRVSKDGNGALPLNLTCTVSPSEEYWSRYVLHIQGSQGIGSPGEIRWNLCLCLLLAWVIVFLCILKGVKSSGKVVYFTATFPYLILLMLLVRGVTLPGAWKGIQFYLTPQFHHLLSSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAITSILAGFAIFSVLGYMSQELGVPVDQVAKAGPGLAFVVYPQAMTMLPLSPFWSFLFFFMLLTLGLDSQFAFLETIVTAVTDEFPYYLRPKKAVFSGLICVAMYLMGLILTTDGGMYWLVLLDDYSASFGLMVVVITTCLAVTRVYGIQRFCRDIHMMLGFKPGLYFRACWLFLSPATLLALMVYSIVKYQPSEYGSYRFPPWAELLGILMGLLSCLMIPAGMLVAVLREEGSLWERLQQASRPAMDWGPSLEENRTGMYVATLAGSQSPKPLMVHMRKYGGITSFENTAIEVDREIAEEEESMM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

41U_A_8(4XNU)
?
[Raw transfer]



41X_A_10(4XNX)
?
[Raw transfer]



B40_A_4(4XP6)
?
[Raw transfer]



21B_A_7(4M48)
?
[Raw transfer]



COC_A_9(4XP4)
?
[Raw transfer]



42L_A_4(4XPG)
?
[Raw transfer]



1WE_C_9(4XP9)
?
[Raw transfer]



42F_A_5(4XP5)
?
[Raw transfer]



42J_A_6(4XPA)
?
[Raw transfer]



LDP_A_11(4XP1)
?
[Raw transfer]



N9S_A_4(4XNX)
?
[Raw transfer]



N9S_A_10(4XPA)
?
[Raw transfer]



N9S_A_6(4XPB)
?
[Raw transfer]



MAL_C_6(4XP9)
?
[Raw transfer]



MAL_A_7(4XP1)
?
[Raw transfer]



N9S_A_11(4XPH)
?
[Raw transfer]



MAL_A_7(4XP4)
?
[Raw transfer]



DMU_A_4(4XPF)
?
[Raw transfer]



MAL_A_5(4XP6)
?
[Raw transfer]



N9S_A_9(4XPT)
?
[Raw transfer]
10 PsiBlast_PDB 99.6147%-159 - C6 -4XPA 3.4 ?
14 PsiBlast_PDB 99.5747%-162 - C6 -4XNU 4.2 ?
11 PsiBlast_PDB 99.5447%-159 - C6 -4XP9 3.6 ?
6 PsiBlast_PDB 99.4947%-159 - C6 -4XNX 3.6 ?
13 PsiBlast_PDB 99.4547%-159 - C6 -4M48 2.4 ?
9 PsiBlast_PDB 99.4147%-158 - C6 -4XP4 2.8 ?
8 PsiBlast_PDB 99.3447%-159 - C6 -4XP6 3.0 ?
5 PsiBlast_PDB 99.1847%-161 - C6 -4XP1 2.0 ?
7 PsiBlast_PDB 99.0947%-158 - C6 -4XP5 4.3 ?
2 PsiBlast_PDB 98.9647%-161 - C6 -4XPH 2.2 ?
1 PsiBlast_PDB 98.6147%-161 - C6 -4XPT 2.1 ?
3 PsiBlast_PDB 98.4447%-160 - C6 -4XPB 2.6 ?
12 PsiBlast_PDB 98.3647%-161 - C6 -4XPG 3.4 ?
4 PsiBlast_PDB 97.9347%-160 - C6 -4XPF 3.6 ?
31 Fugue 77.1223%-148 * C6 *2A65 - ? -
21 HHSearch 76.0824%-165 - C6 -2A65 - ? -
19 PsiBlast_PDB 75.9227%-159 - C6 -4MMD - ? -
18 PsiBlast_PDB 75.7627%-160 - C6 -4MMC - ? -
17 PsiBlast_PDB 75.7227%-159 - C6 -4MMB - ? -
20 PsiBlast_PDB 75.5927%-159 - C6 -4MME - ? -