Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVI---STINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKK-----YLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP |
4J8Q Chain:A ((6-198)) | -----------------------------DGYSLGDIAVDWATVRVVGGDT--YSLNADRWGTLWPA-ATAIPFYKPIDGQRVITYFNPLYDNYEGYDHAVKVEHNYNVLTKQVEDLTAE--NESEFGNDPV-----WVNKDMMWIGGGYLNVIFRQNL------KHLVSLVRDMRA--TAAEGE---DDGYIHLELRYKTYDD----QANGAVSFNLNSLD--LTGKKGIKVKLNSVKDG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54864 for 1178 contacts (-46.6/contact) +
2D Compatibility (PS) -18673 + (NN) -4052 + (LL) 4312
1D Compatibility (HY) -12000 + (ID) 3000
Total energy: -88277.0 ( -74.94 by residue)
QMean score : 0.335
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