Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGAAE-WDVHDGVF-----TVNKKKGDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIF------------LQGMYEVQVLDCYNNP----TYVNG-----QTGSIYKQSIPLANAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTTILGTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIWIREL |
| 3U1X Chain:A ((23-235)) | ----------------------------------------------------------------------LLFNGKDFTGWKMFNGGDVKGWQVEDGVIVGYGN----VSTDIVTVKNYHNFQIKWDWKIG--------AQGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEGLEDWQKTGCNYAMYVPETKQVNPPGEWNSSMVLYKDGYVEH---WLNGEKLFSFQEGSEDWKMRRYSG--KWEAFPDYGISTTGKLCFQDHG---SKVYFKNVKIKDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47762 for 1271 contacts (-37.6/contact) +
2D Compatibility (PS) -18388 + (NN) -2833 + (LL) 4084
1D Compatibility (HY) -11600 + (ID) 2700
Total energy: -79199.0 ( -62.31 by residue)
QMean score : 0.326
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