Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
1ENV Chain:A ((29-153))
----------------------------EARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLK---------------------------------------WMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELD
General information:
TITO was launched using:
RESULT:
Template:
1ENV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4704 for 402 contacts (11.7/contact) +
2D Compatibility (PS) -9492 + (NN) -4748 + (LL) 3692
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -20844.0 ( -51.85 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_1ENV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ENV-query.scw
PDB file :
Tito_Scwrl_1ENV.pdb
: