Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLR---SGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS |
1G2I Chain:A ((59-156)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------PEEFDALVLP---GGRAPERVRLNEKAVSIARKMFSEGKP------VASICHGPQ--ILISAGVLR-GRKGTSYPGIKDDMINAGVEWVDAEVVVDGNWVSSRVPADLYA-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1G2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3034 for 748 contacts (4.1/contact) +
2D Compatibility (PS) -10184 + (NN) -4592 + (LL) 12732
1D Compatibility (HY) -4000 + (ID) 1800
Total energy: -4810.0 ( -6.43 by residue)
QMean score : 0.151
|
|
|