Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFVSGPGDLLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARFDDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHPTKAFDGEWISTFTPGSADAIAMAVERLTASLPSGSWFPDQPLTRDFDEDAATHREPVLQRRTQKA |
| 1PZD Chain:A ((252-299)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVKFLGMHPCERS--DKVPDNKNTHTLLLAGVFRGGHDILVRSRLLLLDT-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9520 for 231 contacts (-41.2/contact) +
2D Compatibility (PS) -5401 + (NN) -2170 + (LL) 16332
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -4709.0 ( -20.39 by residue)
QMean score : 0.045
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