Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPISEKQIDTSIITSTHPRLIPHDLTIPQNLET-----IFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKI-----SDTLEEKVSVS--IPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYPILTWISS-PDNSYNGPFMSWYFANWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISINNVTEMAPTSPIKTN |
| 2D42 Chain:A ((37-191)) | ----------------------------------------------------RIAGLDARIPDPIVTDPVNHIVLDRRIITNTTSNSLEGVFSFSNAYTSRTSSQTRDGVTAGTNITGKYFANLFFEQVGLSGRIAFEGAVTNENKYTLDA-------TQDFRD---------SQTIRVPPFHRATGVYTLEQGAF----EKMTVLECV--VSGNGIIRYYRTLPDNSY--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6041 for 768 contacts (7.9/contact) +
2D Compatibility (PS) -15744 + (NN) -7484 + (LL) 8112
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -19425.0 ( -25.29 by residue)
QMean score : 0.088
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