Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | CSFGIENTAGGSAVFHNYTRGASNSVTKNNQLLGGYGSRPWLGSTYTEHSNAALHFLGAGDTSATNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGAMHSDLGLVRSIETLNAAVPRFNAPSIQDGRGLKIVAPQAPEIDLIAPRGSGASAPAIRAMWCDGSLADTTRYIGATQPGSTFYIGASGHDGEKFDSMRGSVAIKSAGGWGPTSTPTQVVLETCESGSISRLPRWGVDHNGTLMPMADNRYNLGWGSGRVKQVYAVNGTINTSDARLKNDVRAMSDPETEAAKAIAKEIGFWTWKEQADMND----IREHCGLTVQRAIEIMESFGLDPFKYGFICYDKWDEHTVVSEYGPANEDGTENPIYKTIPAGDHYSFRLEELNLFIAKGFEARLSAIEDKLGM |
3GUD Chain:A ((3-104)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERHKTDIAPISDKVLDAWE----KVKFYQYKFKDAVDEKGEEARYHFGVIAQQIVKVFEDEGLSAFDYGLVGYDEWE--ATEDEY-----DSEGNLVEKGREAGNIYSIRPTE---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20724 for 502 contacts (-41.3/contact) +
2D Compatibility (PS) -10559 + (NN) -2046 + (LL) 12688
1D Compatibility (HY) -5200 + (ID) 1600
Total energy: -27441.0 ( -54.66 by residue)
QMean score : 0.069
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