Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | GALTAQGASFFTAAPLSYNTGNSTISLDYRSPQLRVSGGALALTSPVFV-YQTP-FNTPMRLRNGTYNEYADAHIQMVRFGTTVLFNIDVTGETNATGTQTWELQFDGTLGSCLTGRMQVMGGTGEELDVTPTFILPTSDKSVYKQGFMPIVCSENGEFKQSTYCSYALTYRLGNFYITLKSTTSGCKPIFQMSFMYESQIGIV |
3SZQ Chain:A ((111-161)) | ----------FHAGPSMNNLHLHIMTLDHVSPSLKNSAHYISFTSPFFVKIDTPTSNLPTR----------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12736 for 212 contacts (-60.1/contact) +
2D Compatibility (PS) -4955 + (NN) -1723 + (LL) 8860
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -13154.0 ( -62.05 by residue)
QMean score : 0.039
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