Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITYKKLLDELKKEIGPIA-KIFLNKAMESLGYDDVDDSNYKEILSVLKMNKEL--REYVEIVEERLEKEG
2DGW Chain:A ((319-368))
----------------PVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREK-----
General information:
TITO was launched using:
RESULT:
Template:
2DGW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4561 for 202 contacts (22.6/contact) +
2D Compatibility (PS) -4744 + (NN) 594 + (LL) 1780
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -1509.0 ( -7.47 by residue)
QMean score : 0.059
(partial model without unconserved sides chains):
PDB file :
Tito_2DGW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DGW-query.scw
PDB file :
Tito_Scwrl_2DGW.pdb
: