Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVKRRTFLQGAAGAIGLAMAQGALSKIVYAQGAAGTLRVAIAKPAGNLDPQSHYAIWAIQDLMFEPLVKYGKGGQIEPCLATDWKIEDGGKTLHLTLREGVKFQDGTKFDAAACKWNLERWMGIDQ-FSWMNCSKHFQSLEVVDDYHITVHFKEPVLALMQELSYTRPTRFLSP---KSVDADGKFKEPVGTGPWV-QISADDTQSVFEHYDGYWGDKPTYERLEAKVIPDARSRVAALRAGEIDLV-GGFWIAPLTPEEGKQLEAAGFNVVVDPGNVTLVMAFNPDRAEPLKDPQVRKAVSIGIDRAAISKVLYHGYAKPAGNMFSAALPYAGKQFDAPVRDAAAASALLEKAGWT---GSPIRSKDGKPLTLEL-VVSPDAVPGSRVIAEVIQSEMKEVGIDLVIRSVDHASKHTDMLEQKYDLGFFLTYGAPYDPFGSLVALCLSTFKNDVEGKLVTDPVNLDPLINAATAATGD-QIEPTIQKVYDWLRDNDAIAPLVYVPSIWAHSKRVQGFTSPVTEYDMPYENIVLAE |
3QIM Chain:A ((30-497)) | ------------------------------------------------------------QSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLYGNEGLLPLD-TFARFSQNPAYHTQLSQPIETVMLALNTAKA-PTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPSQYDPQKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDAL--SKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSIADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQI---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -207149 for 3687 contacts (-56.2/contact) +
2D Compatibility (PS) -49786 + (NN) -27640 + (LL) 5044
1D Compatibility (HY) -29200 + (ID) 6700
Total energy: -315431.0 ( -85.55 by residue)
QMean score : 0.426
|
|
|