Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSETTIILTDDGVTDIGMARNTIHQMVGLVDDLVASEATASQLREALYAALARGLGFQASVGQSSPLLLRRSVLLSLRGLARRLARIEADALTDDIQPRDIVLSAKELSEWLQEGDVVTVTIPGGPCTRYRILEGDTSNG
3F8T Chain:A ((449-492))
----------------------------------------------------------------------RRQLESVERLAKAHARMR---LSDDVEPEDVDIAA-ELVDWYLE---TAMQ-------------------
General information:
TITO was launched using:
RESULT:
Template:
3F8T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2544 for 243 contacts (-10.5/contact) +
2D Compatibility (PS) -4800 + (NN) -3053 + (LL) 5256
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -8791.0 ( -36.18 by residue)
QMean score : 0.110
(partial model without unconserved sides chains):
PDB file :
Tito_3F8T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F8T-query.scw
PDB file :
Tito_Scwrl_3F8T.pdb
: