Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AARYDDVLYFPASRYPETGAHISDAIKAGHADVCTIERSGADKRRQESLKGIPTKPGFDRDEW--PMAMCEEGGKGASVRYVSSSD-----NRGAGSWVGNRLNGYADGTRILFIVQ
2VZY Chain:A ((72-126))
--------------------------------------------------------GFKRDDWSLPLAVLVDG-RAVGVQALSSKDFPITRQVDSGSWLGLRYQGHGYGTEM-----
General information:
TITO was launched using:
RESULT:
Template:
2VZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3543 for 243 contacts (14.6/contact) +
2D Compatibility (PS) -5302 + (NN) -3524 + (LL) 3512
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -6371.0 ( -26.22 by residue)
QMean score : 0.094
(partial model without unconserved sides chains):
PDB file :
Tito_2VZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VZY-query.scw
PDB file :
Tito_Scwrl_2VZY.pdb
: