Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLT--VYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR |
| 1JS8 Chain:A ((23-111)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKVQADTSDNGYQKIASYHGIPLSCHYE--NGTAYACCQHGMVTFPNWHRLLTKQMEDALVAKGSHVGIPYWDWTTTFANLPVLVTEEKDN------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7824 for 429 contacts (-18.2/contact) +
2D Compatibility (PS) -8932 + (NN) -3462 + (LL) 27176
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: 3408.0 ( 7.94 by residue)
QMean score : 0.041
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