Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYL----MDTEAVNEQLIELNE---------QLTMRLKEKGLKPGEKGATKQLRTLIQEILTEAGFREGMLQTIGNKPLKKEDFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIYKKLGHQDSSNPNYPFTCWDVLIDKLGEIDSRSPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLENPPEHYEKHEEIENILMPKPK |
| 2VA8 Chain:A ((269-346)) | ----------------------------ALKIANYMNFVSLDENALSEILKQLDDIEEGGSDEKELLKSLISKGVAYHHAGLSKALRDLIEE-----GFRQRKIKVIVATP--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9067 for 426 contacts (21.3/contact) +
2D Compatibility (PS) -7039 + (NN) -3769 + (LL) 12208
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: 4417.0 ( 10.37 by residue)
QMean score : 0.107
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