Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQEN---GLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEW-VPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS
3MSW Chain:A ((6-108))
----------------------------KQFIHNDTMEGGKLVCREIYAMNDAASGILNPVKMYKYSYDTDQQKTVKSTYAWNIFKNTWETESRTVISRYET---ETSVEYSVWNKEKGSFDLSKKYIYITDNN------
General information:
TITO was launched using:
RESULT:
Template:
3MSW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 906 for 553 contacts (1.6/contact) +
2D Compatibility (PS) -10781 + (NN) -2811 + (LL) 3096
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -15890.0 ( -28.73 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_3MSW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MSW-query.scw
PDB file :
Tito_Scwrl_3MSW.pdb
: