Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLLLVFLSLTWLSASAQALVPITWTAYGLTFEAPKGILVEEDTEETFLLNNSRFYITIQSLDSDGMTKSDLKSVLKDYANDDGVKDQSAVQEFELPQFFGTYLKGSCETDHCLYACLMTKAAGSGFYISIIYSKENENIAEKILKSFTMEE |
| 2YDP Chain:A ((44-105)) | ---------------------------------------------TWENYSPEPPNVWFPIVKSKDGGKTWKEISKV-KDTQNNWGLRYQP--QLYELPRAFGKYPKGTV-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4973 for 295 contacts (16.9/contact) +
2D Compatibility (PS) -6573 + (NN) -1379 + (LL) 8496
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: 2117.0 ( 7.18 by residue)
QMean score : 0.054
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