Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHHHHHHLIPAEQLPPLKEEEVIEKIENDACIQKSLEKIRALSKLIYNNPEIL--EQDISHINANPKMGRELSERIINSPKSIGRLKGRKIGYIKSQKYKISEQNAKILSNEIFNYADKVSNIRCTIMREHKAKGRRLLQTVKMPS |
3CUP Chain:B ((31-86)) | -------------------ERHFVHQFKGECYFTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAE------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1052 for 268 contacts (3.9/contact) +
2D Compatibility (PS) -5565 + (NN) 900 + (LL) 6384
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -3079.0 ( -11.49 by residue)
QMean score : -0.024
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