Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SNAMPFLPDPGEPSPLKVVIAGAGYVGTCLAVTLAGRGAEVVAVDSDPGTVADLRAGRCRLPEPGLAGAVRDLAATGRLTASTSYDPVGAADVVIVTVGTPTDAGHEMVTD--QLVAACEQIAPRLRAGQLVILKSTVSPGTTRTLVAPLLESGGLVHERDFGLAFCPERLAEGVALAQVRTLPVVVGGCGPRSAAAAERFWRSALGVDVRQVPSAESAEVVKLATNWWIDANVAIANELARYCAVLGVDVLDVIGAANTLPKGSSMVNLLLPGVGVGGSCLTKDPWMAWRDGRDRGVPLRTVETARAVNDDMPRHTAAVIADELVKLGRDRNDTTIAVLGAAFKNDTGDVRNTPVRGVVAAL-RDSGFRVRIFDPLADPAEIVARFGTAPAASLDEAVSGAGCLAFLAGHRQFHELD---FGALAERVDEPCLVFDGRMHLPPARIRELHRFGFAYRGIGR |
| 3OJL Chain:A ((13-407)) | ----------------KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPE---ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIET-DARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPR----VNIHQPGPGVGGHCLAVDPYFIIAKDPENA---KLIQTGREINNSMP----AYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELDFV--------EHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKV-----IFDTK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258736 for 3248 contacts (-79.7/contact) +
2D Compatibility (PS) -42710 + (NN) -20711 + (LL) 2224
1D Compatibility (HY) -30000 + (ID) 6000
Total energy: -355933.0 ( -109.59 by residue)
QMean score : 0.400
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