Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDHSHHMGMSYMDSNSTMQPSHHHPTTSASHSHGGGDSSMMMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVVDITEHCH |
| 2LS4 Chain:A ((1-24)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------YNGYLCIAVAAGAGTGYFLFSWKK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2066 for 91 contacts (-22.7/contact) +
2D Compatibility (PS) -2612 + (NN) -412 + (LL) 12316
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: 1626.0 ( 17.87 by residue)
QMean score : -0.153
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