Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAEARVSRWYFGGLASCGAACCTHPLDLLKVHLQTQQEVK--LRMT---------GMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSK-GEYQGVFHCAVET-AKLGPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIKVPS |
| 2LCK Chain:A ((21-296)) | -------------GTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHA-GIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRR--YQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48317 for 1457 contacts (-33.2/contact) +
2D Compatibility (PS) -26577 + (NN) -281 + (LL) 1512
1D Compatibility (HY) -16400 + (ID) 5250
Total energy: -95313.0 ( -65.42 by residue)
QMean score : -0.042
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