Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAATAAAALAAADPPPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAH------NHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSM-----AGMTAVICTYPLDMVRVRLAFQV-KG--EHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRMQLGTVLPEFEKCLT-MRDTMKYVYGHHGIRKGLYRGLSLNYIRCIPSQAVAFTTYELMKQFFHLN
1OKC Chain:A ((8-293))------------------------------------LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF-KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM----------LPDPKNVHII-----VSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEG-PKAFFKGAWSNVLRGMGG-AFVLVLYDEI-------


General information:
TITO was launched using:
RESULT:

Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114103 for 1956 contacts (-58.3/contact) +
2D Compatibility (PS) -27877 + (NN) 2597 + (LL) 3936
1D Compatibility (HY) -20000 + (ID) 4350
Total energy: -159797.0 ( -81.70 by residue)
QMean score : 0.115

(partial model without unconserved sides chains):
PDB file : Tito_1OKC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OKC-query.scw
PDB file : Tito_Scwrl_1OKC.pdb: