Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPSRLQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGLAGVLALWVLVTHVMYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF |
| 3J1Z Chain:P ((44-75)) | -----------------------------------------------------------------------------------------------------SLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3310 for 113 contacts (-29.3/contact) +
2D Compatibility (PS) -2976 + (NN) 4366 + (LL) 9344
1D Compatibility (HY) -2400 + (ID) 600
Total energy: 4424.0 ( 39.15 by residue)
QMean score : -0.224
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