Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPS----LPGQPPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQ---KHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQIQASSGE-SKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL |
2LCK Chain:A ((16-292)) | ------------KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVA---GLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLA-GSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDL--PCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCAL-TMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55447 for 1482 contacts (-37.4/contact) +
2D Compatibility (PS) -27763 + (NN) -4035 + (LL) 1084
1D Compatibility (HY) -8800 + (ID) 3800
Total energy: -98761.0 ( -66.64 by residue)
QMean score : 0.085
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