Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELRSGSVGSQAVARRMDGDSRDGGGGKDATGSEDYENLPTSASVSTHMTAGAMAGILEHSVMYPVDSVKTRMQS-------LSPDPKAQYTSIYGALKKIMRTEGFWRPLRGVNVMIMGAGPAHAMYFA-----CYENMKRTLNDVFHHQGNSHLANG---IAGSMATLLHDAVMNPAEVVKQRLQMY-----NSQHRSAISCIRTVWRTEGLGAFYRSYTTQLTMNIPFQSIHFITYEFLQEQVNPHR--TYNPQSHIISGGLAGALAAAATTPLDVCKTLLNTQENVALSLANISGRLSGMANAFRTVYQLNGLAGYFKGIQARVIYQMPS--TAISWSVYEFFKYFLTKRQLENRAPY |
| 2LCK Chain:A ((23-298)) | ------------------------------------------------------AACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEG---PRSLYNGLV--AGLQRQMSFASVRIGLYDSVKQ-----FYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKT---RYMNSAL------GQYHSAGHCALTMLRKEGPRAFYKGF-------MPSFLRLGSWNVVMFVTYEQLKRALMAAYQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24781 for 1335 contacts (-18.6/contact) +
2D Compatibility (PS) -25864 + (NN) -522 + (LL) 3812
1D Compatibility (HY) -13600 + (ID) 3800
Total energy: -64755.0 ( -48.51 by residue)
QMean score : -0.093
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