Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWEPKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPSPVTNG-----TSPAQLNGGSACSSRSDL--PGSDKDTEDGSAWKQDPFQESG-----------LHLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF |
| 2KRG Chain:A ((146-358)) | ----------------------------------------------------------------------------------------------------------------------------------------------PFTMLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQMDWSKKNELFSNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24540 for 1050 contacts (-23.4/contact) +
2D Compatibility (PS) -19910 + (NN) -5955 + (LL) 8000
1D Compatibility (HY) -12800 + (ID) 5400
Total energy: -60605.0 ( -57.72 by residue)
QMean score : 0.509
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