Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEK-----RKSKTTHM-----VLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVKG-QHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLL--LVFNPAIQFMFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAIATTV-TYPLQTVQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH |
2LCK Chain:A ((30-297)) | -------------------------ITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGR-----RYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA-ELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKT--RY-------MNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAPF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45712 for 1339 contacts (-34.1/contact) +
2D Compatibility (PS) -25946 + (NN) -2643 + (LL) 3232
1D Compatibility (HY) -12400 + (ID) 3650
Total energy: -87119.0 ( -65.06 by residue)
QMean score : 0.071
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