Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPPPDEARRDMAGDTQWSRPECQAWTGTLLLGTCLLYCARSSMPICTVSMSQDFGWNKKEAGIVL------------SSFFWGYC-----LTQVVGGHLGDRI-GGEKVILLSASAWGSITAVTPLLAHLSSAHLAFMTFSRILMGLLQGVYFPALTSLLSQKVRESER-----AFT--YSIVGAGSQFGTLLTGAVGSLLLEWY----GWQSIFYFSGGLTLLWVWYVYRYLLSEKDLILALGVLAQSRPVSRHNRVPWRRLFRKPAVWAAVVSQLSAACSFFILLSWLPTFFEETFPDAKGWIFNVVPWLVAIPASLFSGFLSDHLINQGYRAITVRKLMQGMGLGLSSVFALCLGHTSSFCESVVFASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRVDLSSTHEDL |
| 4LEP Chain:A ((9-182)) | -------------------------------------SKTHSFMTVSLIELWERFGYYGMQALIVYFMVQRLGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKRTMLLGA----GILSVGYALMTVPTENTWFMFSALGVIVVGNGLFKPNAGNLV-RKIYEGDDSKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYALMHKSLANYGVNKKSLAIVLALAALSVVASAIILEYEDVARVFVYAAGVAVLGIFFHLIRPSERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFWTWSPAQFQALNPIWIMVLSPVLAWSYSWDFSIAAKFALGFAVVAIGFFIYGFAGQFAVNGKTSSWVMIWGYASYSLGELLVSGLGLAMIARYGFMMGAYFVASGISQYLGGVVANFASVPQDLVDPLQTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73462 for 1018 contacts (-72.2/contact) +
2D Compatibility (PS) -14397 + (NN) 1463 + (LL) 1968
1D Compatibility (HY) -11600 + (ID) 2150
Total energy: -98178.0 ( -96.44 by residue)
QMean score : -0.002
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