Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFEELLEQVGGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSSCLRFAYPQALPNTTLGEERQSRGELEDEPATVPCSQGWEYDHSEFSSTIATESQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLEL-EWLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRD---WRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLLHCARLNGRPVCEDSFSQEAVSKVAAGERVVRRPSYLDLFRTPRLRHISLCCVVVWF----GVN-FSYYGLSLDV-SGLGLNVYQTQLLFGAVELPS-KLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDM--------KSWSTV--LAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPL--AALLDGVWLSLPKLTYGGIALLAAGTAL-LLPETRQAQLPETIQDVERKSAPTSLQEEEMPMKQVQN |
| 4LDS Chain:A ((54-427)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------GAIVGAGSSGPLADKLGRRRLVMLIAIVFIIGALILAASTNLALLIIGRLIIGLAVGG-SMSTVPVYLSEMAPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLL-ENRNEEAARQVMKITY-DDSEIDKELKEMKEINAISESTWTVIKSPWLG-------RILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLG----EAASILGSVGIGTINVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALSTEWVFLIFAFIGVLAMIFVIKFLPETRG------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180480 for 2711 contacts (-66.6/contact) +
2D Compatibility (PS) -35261 + (NN) -2332 + (LL) 13608
1D Compatibility (HY) -30000 + (ID) 4650
Total energy: -239115.0 ( -88.20 by residue)
QMean score : 0.175
|
|
|