Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFQDLLGHAGDLWRFQILQTVFLSIFAVATYLHFMLENFTAFIPGHRCWVHILDNDTVSDNDTGALSQDALLRISIPLDSNMRPEKCRRFVHPQWQLLHLNGTFPNTSDADMEPCVDGWVYDRISFSSTIVTEWDLVCDSQSLTSVAKFVFMAGMMVGGILG----GHLSDRFGRRFVLRWCYLQVAIVGTCAALAPTFLIYCSL-RFLSGIAAMSLITNTIMLIAEWATHRFQAMGITLG-----MCPSGIAFMTLAGLAFA-IRDWHILQLVVSVPYFVIFLTSSWLLESARWLIINNKPEEGLKELRKAAHRSGMKNARDTLTLEILKSTMKKELEAAQKKKPSLCEMLHMPNICKRISLLSFTRFANFMAYFGLNLHVQH---------LGNNVFLLQTL-FGAVILLANCVAPWALKYMNRRA------SQMLLMFLLAICLLAIIFVPQEMQTLREVLATLGLGASALANTLAFAHGNEVIPTIIRARAMGINATFANIAGALAPLMMILSVYSPPLP------WIIYGVFPFISGFAFL----LLPETRNKPLFDTIQDEKNERKDPREPKQEDPRVEVTQF |
| 4LDS Chain:A ((39-427)) | -----------------------------------------------------------------------------------------------------------------------------------------------LNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLVMLIAI-VFIIGALILAASTNLALLIIGRLIIGLAVGGSMSTVPVYLSEMAPTEYRG---SLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLL-ENRNEEAARQVMKITYDDS----------EIDKEL--KEMKEINAISESTWTVIKSPWLGR--ILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPELFPMRARGAATGISALVLNIG------TLIVSLFFPILSDALSTEW-VFLIFAFIGVLAMIFVIKFLPETRG-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260623 for 2684 contacts (-97.1/contact) +
2D Compatibility (PS) -36155 + (NN) -8010 + (LL) 13808
1D Compatibility (HY) -34000 + (ID) 4700
Total energy: -329680.0 ( -122.83 by residue)
QMean score : 0.250
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