Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFEELLSQVGGLGRFQMLHLVFILPSLMLLIPHILLENFAAAIPGHRCWVHMLDNNTGSGNETGILSEDALLRISIPLDSNLRPEKCRRFVHPQWQLLHLNGTIHSTSEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP----------TFPVY--------CVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIIL----------GGLAYVFRD-WQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRKVARTNGIKNAEETLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFLRFA--NTIPFYGTMV-NLQHVGSNIFLLQ-VLYGAVALIVRCLALLTLNHMGRRISQIL--FMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVA-VHFIELIPTVLRARASGIDLTASRIGAALA----PLL----MTLTVFFTTLPWIIYGIFPIIGGLIVF-LLPETKNLPLPDTIKDVENQKKNLKEKA |
| 4GBY Chain:A ((65-479)) | --------------------------------------------------------------------------------------------------------------------------------------------------------LIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKI--------MGNTLATQAVQE-IKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265685 for 3087 contacts (-86.1/contact) +
2D Compatibility (PS) -38095 + (NN) -9865 + (LL) 11692
1D Compatibility (HY) -34400 + (ID) 4500
Total energy: -340853.0 ( -110.42 by residue)
QMean score : 0.252
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