Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSRHFEGIYDHVGHFGRFQRVLYFICAFQNISCGIHYLASVFMGVTPHHVCRPPGNVSQVVFHNHSNWSLEDTGALLSSGQKDYVTVQLQNGEIWELSRCSRNKRENTSSLGYEYTGSKKEFPCVDGYIYDQNTWKSTAVTQWNLVCDRKWLAMLIQPLFMFGVLLGSVTFGYFSDRLGRRVVLWATSSSMFLFGIAAAFAVDYYTFMAARFFLAMVASGYLVVGFVYVMEFIGMKSRTWASVHLHSFFAVGTLLVALTGYLVRTWWLYQMILSTVTVPFILC---CWVLPETPFWLLSEGRYEEAQKIVDIMAKWNRASSCKLSELLSLDLQGPVSNSPTEVQKHNLSYLFYNWSITK-----RTLTVWLIW-----FTG--SLGFYSFSL-NSVNLG-GNEYLNLFLLGVVEIPAYTFVCIAMDKVGRRTVLA---YSLFCSALACGVVM---VIPQKHYILGVVTAMVGKFAIGAAFG-LIYLYTAELYPTIVRSLAVGSGSMVCRLASILA----PFSVD-LSSIWIFIPQLFVGTMALLSGVLTLK-LPETLGKRLATTWEEAAKLESENESKSSKLLLTTNNSGLEKTEAITPRDSGLGE |
4LDS Chain:A ((51-427)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------MLIGAIVGAGSSGPLADKLGRRRLVMLIAIVFIIGALILAASTNLALLIIGRLIIGLAVGGSMSTVPVYLSEMAPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLL-ENRNEEAARQVMKITYDDSEIDKELKEMKEIN---AISES--------------TWTVIKSPWLGRILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVF-FGISWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALSTEWVFLIFAFIGVLAM---IFVIKFLPETRG------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280263 for 2668 contacts (-105.0/contact) +
2D Compatibility (PS) -35373 + (NN) -651 + (LL) 13448
1D Compatibility (HY) -30000 + (ID) 4400
Total energy: -337239.0 ( -126.40 by residue)
QMean score : 0.156
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