Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDPIFTLAPPLHCHYGAFPPNASGWEQPPNASGVSVASAALAASAASRVATSTDPSCSGFAPPDFNHCLKDWDYNGLPVLTTNAIGQWDLVCDLGWQVILEQILFILGFASGYLFLGYPADRFGRRGIVLLTLGLVGPCGVGGA---------AAGSSTGVMALRFLLGFLLAGVDLGVYLMRLELCDPTQRLRVA---LAGELVGVGGHFLFLGLALV-----------------SKDWRFLQRMITAPCILF--LFYGWPGLFLESARWLIVKRQIEEAQSVLRILAERNRPHGQMLGEEAQEALQDLENTCPLPATSSFSFASLLNYRNIWKNLLILG------------FTNFIAHAIRHCYQP--VGGGGSPSDFYLCSLLASGTAALACVFLGV-TVDRFGRRGILLLSMTLTGIASLVLLGLWDCEHPIFPTVWAQQGNPNRDLNEAAITTFSVLGLFSSQAAAILSTLLAAEVIPTTVRGRGLGLIMALGALGGLSGPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDGELCRRPSLLRQPPPTRCDHVPLLATPNPAL |
| 4GBY Chain:A ((76-342)) | ----------------------------------------------------------------------------------------------------------------------GYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVP----ESPRWLMSRGKQEQAEGILR------KIMGNTL---ATQAVQEIKH-------------SLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84627 for 1381 contacts (-61.3/contact) +
2D Compatibility (PS) -23214 + (NN) -10799 + (LL) 10300
1D Compatibility (HY) -17600 + (ID) 3350
Total energy: -129290.0 ( -93.62 by residue)
QMean score : 0.051
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