Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFTDLLDALGSMGRFQLNHTALLLLPCGLLACHNFLQNFTAAVPPHHCRGPANHTEASTNDSGAWLRATIPLDQLGAPEPCRRFTKPQWALLSPNSSIPGAATEGCKDGWV--YNRSVFPSTIVMEWDLVCEARTLRDLAQSVYMAGVLVGAAVFGSLADRLGCKGPLVWSYLQLAASGAATAYFS----SFSAYCVFRFLMGMTFSGIILNSVSLVV-EWMPTRGRTVAGILLGYSFTLGQLI-----LAGVAYLIRPWRCLQFAISAPFLIFFLYSWWLPESSRWLLLH----GKSQLAVQNLQKVAAMNGRKEEGERLTKEVMSSYIQSEFASVCTSNSILDLFRTPAIRKVTCCLMVIWFS------NSVAYYGLAMDLQKFGLSLYLVQAL-FGIINTPAMLVATATMIYVGRRATVASFLILAGLMVIANMFVPEGTQILCTAQAALGKGCLASSFICVYLFTGELYPTEIRQMGMGFASVHARLGGLTAPLVTTLGEYSTILPPVSFGATAILAGLAVCVLTETRNMPLVETIAAMERRVKEGSSKKHVEEKSEEISLQQLRASPLKETI |
| 4PYP Chain:A ((48-334)) | --------------------------------------------------------------------------------------------------------------WVHRYGESILPTTLTTLWSL----------SVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNL-LAFVSAVLMGFSKLGKSFEMLILGRFIIGV-YCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMRE----------KKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSI-FEKAGVQQPVYATIGSGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPET------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151567 for 1718 contacts (-88.2/contact) +
2D Compatibility (PS) -26830 + (NN) 694 + (LL) 10728
1D Compatibility (HY) -20800 + (ID) 3800
Total energy: -191575.0 ( -111.51 by residue)
QMean score : 0.130
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