Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFQDLLDQVGGLGRFQILQMVFLIMFNVIVYHQTQLENFAAFILDHRCWVHILDNDTIPDNDPGTLSQDALLRISIPFDSNLRPEKCRRFVHPQWKLIHLNGTFPNTSEPDTEPCVDGWVYDQSSFPSTIVTKWDLVCESQPLNSVAKFLFMAGMM----VGGNLYGHLSDRFGRKFVLRWSYLQLAIVGTCAAFAPTILVYCSLRFLAGAATFSIIVNTVLLIVEWITHQFCAMALTLTLCAASIGHITLGSLAFVIRDQCILQLVMSAPCFVFFLFS-----RWL------------------AESARWLIINNKPEEGLKELRKAAHRNGMKNAEDILTMEVLKSTMKQELEAAQKKHSLCELLRIPNI-------CKRICFLSFVRFASTIPFWGLTLHLQHLGNNVFLLQTL-FGAVTLLANCVAPWALNHMSRR----------LSQMLLMFLLATCLLAIIFVPQEMQTLRVVLATLGVGAASLGITCSTA---QENELIPSIIRGRATGITGNFANIGGALASLMMILSIYSRPLPWI--IYGVFAILSGLVVL-LLPETRNQPLLDSIQDVENEGVNSLAAPQRSSVL |
| 4LDS Chain:A ((38-427)) | ----------------------------------------------------------------------------------------------------------------------------------------------PLNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLV----MLIAIVFIIGAL-----------ILAASTNLALLIIGRLIIGLAVGGSMSTVPVYLSEMAPTEYRGSLGSL-----NQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLL-ENRNEEAARQVMKITYDDSEIDKE-----------LKEMKEINAISESTWTVIKSPWLGRILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLIMAIL-------IWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALSTEWVFLIFAFIGVLAMIFVIKFLPETRG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245784 for 2556 contacts (-96.2/contact) +
2D Compatibility (PS) -34896 + (NN) -10372 + (LL) 15196
1D Compatibility (HY) -32400 + (ID) 4400
Total energy: -312656.0 ( -122.32 by residue)
QMean score : 0.277
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