Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATGGQQKENTLLHLFAGGCGGTVGAIFTCPLEVIKTRLQSSRLALRTVYYPQVHLGTISGA--GMVRPTSVTP--GLFQVLKSILEKEGPKSLFRGLGPNLVGVAPSRAVYFACYSKAKEQFNGIFVPNSNIVHIFSAGSA-AFITNSLMNPIWMVKTRMQLEQKVRGSKQ-MNTLQCARYVYQTEGIRGFYRGLTASYAGISETIIC--FAIYESLKKYLKEAPLASSANGTEKNSTSFFGLMAAAALSKGCASCIAYPHEVIRTRLREEGT-KYKSFVQTARLVFREEGYLAFYRGLFAQLIRQIPNTAIVLSTYELIVYLLEDRTQ |
| 2LCK Chain:A ((15-292)) | ------------VKFLGAGTAACIADLITFPLDTAKVRLQ------------------IQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVK-QFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVAR-NAIVNCAELVTYDLIKDTLLKANLMT--DDLPCHFTSAFG-------AGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38437 for 1477 contacts (-26.0/contact) +
2D Compatibility (PS) -27134 + (NN) 1951 + (LL) 3516
1D Compatibility (HY) -12400 + (ID) 3800
Total energy: -76304.0 ( -51.66 by residue)
QMean score : 0.018
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