Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQ------------TTYRGIVDCMVKIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQNPSSATVLVAGGF-AGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG |
| 2LCK Chain:A ((16-296)) | ----KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEH------AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQ--ARAGGGR---RYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ--YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71235 for 1516 contacts (-47.0/contact) +
2D Compatibility (PS) -27142 + (NN) -1331 + (LL) 820
1D Compatibility (HY) -10800 + (ID) 3950
Total energy: -113638.0 ( -74.96 by residue)
QMean score : -0.005
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